KEGG   Helicobacter pylori oki128: HPOKI128_07160
Entry
HPOKI128_07160    CDS       T03724                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hpyd  Helicobacter pylori oki128
Pathway
hpyd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPOKI128_07160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpyd03400]
    HPOKI128_07160
Enzymes [BR:hpyd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     HPOKI128_07160
DNA repair and recombination proteins [BR:hpyd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HPOKI128_07160
 Prokaryotic type
     HPOKI128_07160
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AHN38235
Position
1458067..1458768
AA seq 233 aa
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGMPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaaactttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccccaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatcag
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcatgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctgttgttgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagtgatcag
atattgatgcgcctttttgaagccaacgcccccttgatcgtggtgttattaggaaagatc
gcccaaaaaaagatcgctctaatccccaaaaacaaacacatcatcatcaccgcccctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagagatttatcataaggattttgattttagtttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system