KEGG   Helicobacter pylori oki154: HPOKI154_04875
Entry
HPOKI154_04875    CDS       T03725                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
hpye  Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:hpye00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpye03009]
    HPOKI154_04875
Enzymes [BR:hpye01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     HPOKI154_04875
Ribosome biogenesis [BR:hpye03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPOKI154_04875
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AHN39249
Position
complement(976153..976881)
AA seq 242 aa
MEKAYKILSVQENISHKKAKALIDLGLVSVGGKKLMVARKELPKNTHFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKGWVLLHRLDKETSGVILLVRENSEFHLKAKKAFKDR
AVKKEYLALAQGIIEEEQEINAPILTIKTTKAFSKISKKGQEAVTIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNDPGSAKRLMLHAHKISLLGYEFEAIPPKEF
EF
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcacaaaaaagccaaa
gctttgattgatttggggttagtgagtgtaggggggaaaaaattgatggttgccagaaaa
gaattgcctaaaaacacgcattttagcgtccaaaaggttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccctttatagagagctatgatttagtt
tcttttttcaaaggttgggttttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggtgagagaaaattcagaattccatttaaaagcgaaaaaggcttttaaagacagg
gcggttaaaaaggagtatttagcgctcgctcaaggcattatagaagaagagcaagaaatt
aacgctcccattctcacgattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagcggttacgataatcacgcccttaaaaatcatcaataaaaaaacccttttaaaa
gtgggaatcaaaaccggaagaacgcatcaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctttataataatgatccaggttcagccaaacgcttgatgctc
catgcgcataaaatctcgctactagggtatgaatttgaagcgatcccccctaaagaattt
gaattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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