KEGG   Helicobacter pylori oki154: HPOKI154_07080
Entry
HPOKI154_07080    CDS       T03725                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
hpye  Helicobacter pylori oki154
Pathway
hpye03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpye00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOKI154_07080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpye02044]
    HPOKI154_07080
Enzymes [BR:hpye01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HPOKI154_07080
Secretion system [BR:hpye02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HPOKI154_07080
SSDB
Motif
Pfam: T2SSE AAA_16 AAA_29 AAA_23 SRPRB Dynamin_N AAA_22 nSTAND3 AAA_7 MMR_HSR1 RsgA_GTPase FtsK_SpoIIIE DEAD ABC_tran ABC_ATPase DUF815 AAA_2 AAA_35
Other DBs
NCBI-ProteinID: AHN39621
Position
complement(1404452..1405366)
AA seq 304 aa
METLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKINNTREKREHALFDKAFLLR
FCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITANNQITLNIRVPRLKPLSLED
FTFKASNPKGLKDLALKGHNILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLK
AFSNCVGLLVGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGML
STIHANSTQNTLEALSLNLSMRYTHSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLW
TKEL
NT seq 915 nt   +upstreamnt  +downstreamnt
ttggaaactttacaaacccatagagttttacaagccctaattggccattttacccctttt
ttagaaagcgggatcacagagctgatgatcaatactgagcaggagctttggctttataaa
atcaataacacacgagaaaaaagagagcatgcgctttttgataaggcgtttttgctgaga
ttttgcgagcaattggctagttttagggggttgttttttgatgaagagcaccccacttta
aattgctctatccctttcacgcgctatagggtgagtgcgaatcattttagcatcactgca
aacaatcaaatcacgctcaatatccgtgtgcctaggcttaagcccttaagtttagaggat
ttcactttcaaagcaagcaatccaaaaggtttgaaagatttagcgctaaaagggcataac
attctcattagcggggagacttcaagcggtaaaacaagcttattaaacgctcttttagat
tgcgtcaataaagatgaaagggtggtgagcgttgaagacagccaagaactggatttaaaa
gcgtttagtaattgcgtggggcttttagtgggcaagcaagaaaacacgcgctttaattat
gaagacgctctcaatatggccatgcgcttaaacccagacaggctcattgtgggcgagatt
gacaccaggaatgcagcgctctttttgcgtttaggaaacaccgggcataagggcatgctc
tcaaccattcatgctaatagcactcaaaacactttagaagccctttcgttgaatctaagc
atgcgttatacgcattctttggataaggatttaatgcgagcgtattttaaaagcgcgatt
gatgtgatcgtgcatgtgaatagaatcaataatgagcgccaaatcgctgaagtcttatgg
actaaagagctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system