KEGG   Helicobacter pylori oki422: HPOKI422_03910
Entry
HPOKI422_03910    CDS       T03726                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hpyf  Helicobacter pylori oki422
Pathway
hpyf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpyf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPOKI422_03910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpyf03400]
    HPOKI422_03910
DNA repair and recombination proteins [BR:hpyf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HPOKI422_03910
SSDB
Motif
Pfam: Smr MutS_V AAA_22 AAA_21 AAA_15 Emaravirus_P4
Other DBs
NCBI-ProteinID: AHN40525
Position
783377..785626
AA seq 749 aa
MNNNNNNTLPKPLEESLDLKEFIALFKTFFAKEGGITLENDLKQTFTYLNEVDAIGLPTP
KSVKESDLIVIKLTKLGTLHLDEIFEIIKRLRYIVVLQNAFKTFTHLKFHERLNAIVLPP
FFNDLIALLDDEGKIKQGANATLDALNESLNRLKKESIKIIHHYAHSKELAPYLVDTQSH
LKHGYECLLLKSGFSSAIKGVVLERSANGYFYLLPESAQKIVQKIAQIDNEIDCCIVEMC
QTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMVLENFSHPI
LKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIPMKINAHHSIIPYFKE
IHAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEK
LLKQNNQIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETAL
RYGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKNESLENALKEQEDLKNAWLL
EMEKQKEIFHHKKLELEKSYQQALNILKSEVASKDTSSMHKEIHKASEILNKHKTDQEIP
QTITSFQINEKARYKNESVMVIQILDKGYYLIETELGMRLKAHGSWLKKIQKPPKNKFKP
PKTTIPKPKEASLRLDLRGQRSEEALDLLDAFLNDALLGGFEEVLICHGKGSGILEKFVK
EFLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgaataataataataataataccctacccaaacctctagaagaaagcctggatttaaaa
gagtttatcgctctttttaaaaccttttttgccaaagaagggggtatcactctagaaaac
gatctcaagcaaactttcacttatttaaacgaagtggatgcgatcggtttgcctacccct
aaaagcgtgaaagaaagcgatctcattgttattaaactcaccaaattagggacgctccat
ttagatgaaatttttgagattatcaaacgattgcgctacattgtcgttttacaaaacgct
tttaaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccct
ttttttaatgatctgatcgctttattagatgatgaaggaaagatcaaacaaggggcgaac
gctaccctagacgctttgaatgaaagcttgaaccgccttaaaaaagagagtataaaaatc
attcaccattacgcccactctaaagagcttgccccttatttagtggatacgcaaagccac
cttaagcatggctatgaatgccttttattaaagagcgggttttctagcgcaattaaaggc
gttgtgctagaaaggagcgctaatggttatttctatcttttgcctgaaagcgcgcaaaaa
atcgtgcaaaaaatcgcgcaaattgataatgaaatagattgctgtattgttgaaatgtgc
caaactctaagccatagcttgcaaaaacaccttttatttttaaaattcctttttaaagaa
tttgattttttagacagcttgcaagccagacttaatttcgctaaagcttacaatttagaa
tttgtcatgccaagctttactcaaaaaaaaatggttttagaaaacttttcacaccccatt
ttaaaagaaccaaagcccttaaatttgaagtttgaaaaatccatgctcgctgttaccggc
gtgaatgcgggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagc
aaacatctcattcctatgaaaatcaacgcccatcattccattatcccctattttaaagaa
atccacgccattattaatgacccccaaaacagcgcgaacaatatttctacttttgccggt
agaatgaagcaatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaa
atagagctagggactgacgctgatgaagcgagcagcttgtataaaaccctgttagaaaaa
ttgcttaaacaaaacaaccaaatcattatcaccacgcaccacaaacgcttaagcgtgtta
atggcagaaaacaaggaagtggaattactagccgctctttatgatgaggaaaaagaacgg
cccacttacacttttttaaaaggggttattggcaaaagctatgcgtttgaaaccgctttg
cgctatggcgtgccgcattttttgattgaaaaagcgaaagccttctatggcgaagataag
gaaaaattgaatgttttgattgaaaattccagcgcgctagaaagggaattaaaacaaaaa
aatgaaagcttagagaacgctttaaaagagcaagaagatttaaaaaacgcatggctttta
gaaatggaaaaacaaaaagaaatctttcaccataaaaaattggaattggaaaaatcctac
cagcaagccctaaacatcttaaaaagcgaagtcgcttcaaaagataccagctccatgcat
aaagaaatccataaagcgagcgagattttaaacaagcataaaacagaccaggaaatccca
caaacgataacaagctttcaaattaacgaaaaagcgcgctataaaaatgaaagcgtgatg
gttatacaaattttagacaagggctattatttgatagaaaccgagcttggcatgcgttta
aaagcacatgggagttggttgaaaaaaatccaaaaaccccctaaaaacaaattcaaaccc
cctaaaacaaccattcctaaacccaaagaagcgagcttgcgccttgatttaagggggcaa
cgcagcgaagaagccttggatttactagacgcttttttaaacgacgcgcttttagggggc
tttgaagaagttcttatttgccatggcaaggggagcgggattttagaaaagttcgtgaaa
gaatttctaaaaaaccaccctaaagtggtgagctttagcgacgctcccattaatttaggc
ggtagtggggttaaaatcgttaaattgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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