KEGG   Helicobacter pylori oki673: HPOKI673_02175
Entry
HPOKI673_02175    CDS       T03727                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
hpyg  Helicobacter pylori oki673
Pathway
hpyg02020  Two-component system
hpyg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hpyg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HPOKI673_02175
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HPOKI673_02175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpyg03021]
    HPOKI673_02175
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:hpyg02035]
    HPOKI673_02175
Transcription machinery [BR:hpyg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HPOKI673_02175
Bacterial motility proteins [BR:hpyg02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HPOKI673_02175
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 MarR MarR_2 KORA TetR_C_44 HTH_10 DUF4202 HsdM_N DUF4404
Other DBs
NCBI-ProteinID: AHN41684
UniProt: X2I899
Position
413636..414412
AA seq 258 aa
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDAEITKHLNEHGKEPSDAYLAEVLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagcgaaaaaaatatagaaaaagttttgaacgcctatgataagcagcaacaccaccat
caagacgcgctcgctatccagtatttaccggccgtgcgcgctatggcgtttcgtttgaaa
gagcgcttgcctagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgttagattatttgcgttctttagatgtgatttctcgctcc
aatagaaagctgattaaaagcattgatgctgagattaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttggcggaggttttaggcgaaaatattgaaaaaataaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcg
attgagcaagatgagatcactaaaaaaattgaagcagaagagttgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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