KEGG   Helicobacter pylori oki828: HPOKI828_07765
Entry
HPOKI828_07765    CDS       T03728                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hpyh  Helicobacter pylori oki828
Pathway
hpyh03030  DNA replication
hpyh03430  Mismatch repair
hpyh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpyh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPOKI828_07765
   03430 Mismatch repair
    HPOKI828_07765
   03440 Homologous recombination
    HPOKI828_07765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyh03032]
    HPOKI828_07765
   03400 DNA repair and recombination proteins [BR:hpyh03400]
    HPOKI828_07765
Enzymes [BR:hpyh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPOKI828_07765
DNA replication proteins [BR:hpyh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPOKI828_07765
DNA repair and recombination proteins [BR:hpyh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPOKI828_07765
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AHN44079
Position
complement(1547967..1548938)
AA seq 323 aa
MIKISLNSNKWAWMWWFQGVIFLNLKIVSWLLKAYRMSDSLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PLKHEILEIGAVQVRGGEIINRFETLVKVKSVPDFIAELTGITYEDTLNAPSAHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRARHQ
ETLPPFSLFERTKGLLNIIKATS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgataaaaatatctttgaactccaacaagtgggcgtggatgtggtggtttcagggagtt
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgtcagacagc
ctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccaggatttaagctta
ggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaatttggaatattta
aaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacactcaagaacctt
aaaaccccccttaaagatgaggttttttcctttattgatttagaaaccaccggctcttgc
cccctaaagcatgagattttagaaatcggagccgtgcaagtgagggggggggaaatcatc
aatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattttatcgctgagcttaca
ggcatcacttatgaagacaccctaaacgccccaagcgcgcatgaagctttgcaagaattg
cggctttttttaggcaatagcgtgtttgtagcccataacgctaattttgattacaacttt
ttagggcgttattttgtagaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgggccattttatccatgcgttattctttgagctttttaaaagag
cttttagggtttggtatagaagtcagccatagagcctatgcggacgctttagcgagctat
aagctctttgaaatatgcttattaaacttgcccagttacatcaaaacgacaatggatttg
attgatttttccaaatgcgctaacaccttgatcaaaagacccccaagagccagacaccaa
gagactctaccgccattttctctttttgagaggacaaagggtttgttaaatatcataaaa
gcaaccagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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