KEGG   Helicobacter pylori oki898: HPOKI898_03360
Entry
HPOKI898_03360    CDS       T03729                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hpyj  Helicobacter pylori oki898
Pathway
hpyj00470  D-Amino acid metabolism
hpyj00550  Peptidoglycan biosynthesis
hpyj01100  Metabolic pathways
hpyj01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hpyj00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPOKI898_03360
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPOKI898_03360
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    HPOKI898_03360
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpyj01011]
    HPOKI898_03360
Enzymes [BR:hpyj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HPOKI898_03360
Peptidoglycan biosynthesis and degradation proteins [BR:hpyj01011]
 Precursor biosynthesis
  Amino acid ligase
   HPOKI898_03360
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 GARS_A ATPgrasp_TupA RimK
Other DBs
NCBI-ProteinID: AHN44788
Position
complement(660497..661567)
AA seq 356 aa
MQSFLGSLIVEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESN
MHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEF
YRIAFIGPRIEASVLSYSKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIVK
PSNAGSSLGVSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSY
IEEPNKQEFLDFKQKYLDFSRTKAPKANLSNAIEEQLKENFKKLYNDLFDGAIIRCDFFV
IENEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq 1071 nt   +upstreamnt  +downstreamnt
ttgcaatcgtttttagggagtttgatcgtggagttttgcgttttatttggtggggcgagt
tttgagcatgaaatcagcattgtgagtgcgatcgcgcttaaaggagtgttaaaagacagg
attaaatattttatttttttagatgaaaaccatcatttttatttgattgaagaatccaac
atgcattcaaaatacttcgctcaaatcaaagaaaaaaaattaccccccctaatcctcaca
cacaatggcttgcttaaaaactcgtttttaggggctaagattatagaattgcctttagtg
atcaatctcgtgcatgggggcgatggcgaagacgggaaattagcgagcttgttagaattt
tatcgtatcgcttttataggccctaggattgaagcgagcgtgttgagttatagcaaatat
ttaaccaagctttatgccaaagatttaggggtgaagactttagattatgttcttttgaat
gaaaaaaaccgcgctaacgccttggatttgattgggtttaatttccctttcattgtgaaa
cccagtaacgccggaagctctttaggagtgagcgttgtgaaagaagaaaaagaattgatt
tacgctttagacagtgcgtttgaatattctaaagaagttttaatagagcctttcattcag
ggcgtgaaagaatacaatttagccggctgtaagatcaaaaaggatttttgtttttcctat
attgaagagcctaacaaacaggaatttttagatttcaaacaaaaatatttggatttttca
cgcaccaaagcccctaaagcgaatctttctaacgccatagaagagcaattgaaagaaaac
tttaaaaaactctataacgatttgtttgatggcgcgatcattcgttgcgatttttttgtc
atagaaaatgaagtgtatcttaatgagatcaatcccattcctggcagtttggccaattat
ttgtttgatgattttaaaacaacgctagaaaatttagcgcaatcattacccaaaacccct
aaaatcccaatcaaaaactcttatttgttgcaaatccaaaagaataagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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