KEGG T02353: HPAKL86

Helicobacter pylori Aklavik86: HPAKL86_03620

Entry

HPAKL86_03620     CDS       T02353

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

hpyk Helicobacter pylori Aklavik86

Brite

KEGG Orthology (KO) [BR:hpyk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyk03032]
    HPAKL86_03620
   03400 DNA repair and recombination proteins [BR:hpyk03400]
    HPAKL86_03620
Enzymes [BR:hpyk01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPAKL86_03620
DNA replication proteins [BR:hpyk03032]
Prokaryotic type
  DNA Topoisomerases
   HPAKL86_03620
DNA repair and recombination proteins [BR:hpyk03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPAKL86_03620

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2

Other DBs

NCBI-ProteinID:

AFX89734

UniProt:

K7Y2A3

Position

complement(742172..744658)

AA seq 828 aa
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNARLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNKVVKTELLEVKEQ
FSSPRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLDPDEKIM
ATLSTKDFSDERSIAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKD
AKHLLIASYLGLFIKFPLEDVREIGRSTRGVIGIKLNENDFVVGAVVINDDSNKLLSVSE
NGLGKQTLAEAYREQSRGGKGMIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENSENSPTQLFE

NT seq 2487 nt +upstreamnt +downstreamnt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgtgctttaccggac
gctagagatggcttaaagcccgtgcataggcgtattttgtatgcgatgcatgaattaggc
ctcacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcaaggcaactttggctctattgatggcgataac
gctgcggcgatgcgttacactgaagccagaatgaccaaagcgagtgaggaaattttaaga
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgccagattagatgaaattttagaatttgtcaaagggcctgat
tttcccactggcgggatcatttatggcaaagcgggcattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgaaagcgataga
gagggtattagagtggtgattgaattaaaaagagatgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagaaaaggctaaggctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcctaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgctagagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaataaagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaagtttatgaaaatattgatatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaacaaggggcagttgtatcatttgaaagtctataagatcccagaagcgagccgg
attgctatgggtaaagccatcgtgaatttaatctcgctcgatcctgatgaaaagatcatg
gcaactctaagcaccaaagactttagcgatgaacgctctatagctttcttcaccaaaaat
ggcgtggtgaagcgcaccaatttgagcgaatttggcagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattggtgagcgcaaaaattgtggataaagac
gctaagcatttgctcatcgcatcgtatttgggccttttcattaaattccctttagaagat
gtgcgtgagatcggaagaagcactcgtggggttatagggatcaaactgaatgaaaatgat
tttgttgtcggcgcggtcgttattaacgatgacagcaacaagcttttgagcgtgagtgaa
aacgggcttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggaggtaag
gggatgattggcatgaagctcactcaaaaaaccggcaatctagtgagcgttatcagcgtg
gatgatgaaaacctggatttgatgatccttactgcaagcgcgaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaataccagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaattcagaa
aactctcccacacaattgtttgagtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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