KEGG   Helicobacter pylori Aklavik86: HPAKL86_06070
Entry
HPAKL86_06070     CDS       T02353                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
hpyk  Helicobacter pylori Aklavik86
Pathway
hpyk00260  Glycine, serine and threonine metabolism
hpyk00460  Cyanoamino acid metabolism
hpyk00630  Glyoxylate and dicarboxylate metabolism
hpyk00670  One carbon pool by folate
hpyk00680  Methane metabolism
hpyk01100  Metabolic pathways
hpyk01110  Biosynthesis of secondary metabolites
hpyk01120  Microbial metabolism in diverse environments
hpyk01200  Carbon metabolism
hpyk01230  Biosynthesis of amino acids
hpyk01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hpyk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    HPAKL86_06070
  09102 Energy metabolism
   00680 Methane metabolism
    HPAKL86_06070
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HPAKL86_06070
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    HPAKL86_06070
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    HPAKL86_06070
Enzymes [BR:hpyk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     HPAKL86_06070
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1 Aminotran_1_2 HrcA Beta_elim_lyase
Other DBs
NCBI-ProteinID: AFX90201
UniProt: K7Y966
Position
complement(1278921..1280171)
AA seq 416 aa
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYGKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVAGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKPEFKAYAQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatggcaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgccaaagtgagtttaaccggtaagcattatcagagcttt
tcttatggcgtgaatttagatggctatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgatgaagtgggagcgttactattaggcgatatagcccat
gtggcagggcttgtggtagctggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgcaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcgcaattagtgaaatctaacatgcaagttttggctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggatttcttagac
aagccttatagcgggaaagacgctgatattgcattagggaatgccggaatcactgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagcgggataaggattggc
tcagcggcattgagcgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccagtcaattccctgtgtatcaacaacctattttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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