KEGG   Helicobacter pylori OK310: HPOK310_1434
Entry
HPOK310_1434      CDS       T02542                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hpyl  Helicobacter pylori OK310
Pathway
hpyl03030  DNA replication
hpyl03430  Mismatch repair
hpyl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPOK310_1434 (dnaQ)
   03430 Mismatch repair
    HPOK310_1434 (dnaQ)
   03440 Homologous recombination
    HPOK310_1434 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyl03032]
    HPOK310_1434 (dnaQ)
   03400 DNA repair and recombination proteins [BR:hpyl03400]
    HPOK310_1434 (dnaQ)
Enzymes [BR:hpyl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPOK310_1434 (dnaQ)
DNA replication proteins [BR:hpyl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPOK310_1434 (dnaQ)
DNA repair and recombination proteins [BR:hpyl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPOK310_1434 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BAM98862
Position
complement(1534851..1535714)
AA seq 287 aa
MSDSLLHKDIQALIARLKRQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPNYIKT
TIDLIDFSKCANTLIKRPPRAKHQETLVPFSLFERTKGLLNIIKATS
NT seq 864 nt   +upstreamnt  +downstreamnt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcgccag
gatttaagcttaggcatgctagaaaaatcgctctctcgcctgatttatgatgaagtcaat
ttggaatatttaaaagcgtgtgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaagcatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgtgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttggggtttggtatagaagttagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcctattaaacttgcccaattacatcaaaacg
acgatagatttgattgatttttccaaatgcgctaatactttgatcaaaagacccccaaga
gccaaacaccaagagactctagtgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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