KEGG   Helicobacter pylori UM299: K749_02390
Entry
K749_02390        CDS       T02661                                 
Name
(GenBank) RNA polymerase sigma54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
hpym  Helicobacter pylori UM299
Pathway
hpym02020  Two-component system
hpym02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hpym00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K749_02390
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    K749_02390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpym03021]
    K749_02390
Transcription machinery [BR:hpym03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K749_02390
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF3288
Other DBs
NCBI-ProteinID: AGL67865
Position
complement(1520091..1521335)
AA seq 414 aa
MAVLRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKNSSDHLENFAIASKSLFETLEAQIIPPLFPTETSQKIAMDIINGLDSEGYFEENIEE
RAKILGVESEVYEKVHKRFSYLNPAGIGARDVKESFLFQLESRELDNNELYEEVRKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDGEIIVRLNDESY
PTISLEENRFKDSAYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKKLRPL
KLLDLANEFNHSVSTISRAISNKYLACERGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFRLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcggttttacgcgcaaaccttagccctaaaaacaaattaaatgctaccttaaaaggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgcc
ttggataaccccttaatcaaaattgaaaacaaacgcatcaaaaattttagcgatcgtttt
agcgctaaaaatagtagcgatcatttagaaaatttcgcaatcgcctctaaaagccttttt
gaaaccttagaagctcaaatcattccccctctctttcctactgaaacctctcaaaaaatc
gctatggatattatcaacgggctggatagtgaagggtattttgaagaaaacattgaagaa
agggctaaaattttaggggtagagagcgaagtttatgagaaagtgcacaagcgttttagt
taccttaatcccgctggcattggcgctagagatgtgaaagagagctttttattccagcta
gagagtagggaattagacaataacgagctttatgaagaagtgcgaaaaatcattttaaat
ttagaaaaacaccacgaattttctaaagatttttattatgaaaaggctttaaagatttta
aaatcctttaaaaaccccccggccattgagtttttagaaaaagaaatagaagttattccg
gaactttttattctagaagtggatggtgaaatcatcgtgcgtttgaatgatgagagctat
ccgacgatcagtttagaagaaaatcgctttaaagatagcgcttatttaaaagaaaaatta
aaagaggctaaagatttgattgatgcactaaatttgagaaaagccacaatttataaaatc
ggcctcatgcttttagagtatcaatacgatttttttaagggtaaaaaattgcgcccttta
aaattattggatttagccaatgagtttaaccactctgtaagcacgatttcaagggccatt
tctaataaatatttggcatgcgaaaggggggttttccctattaaacatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactaccttttagaattgatc
aaaaatgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccgtttgaaaatggtaagaagaacgatcaccaaataccgccaactgctcaatatc
gcttcttcaagcgaaaggaaaaagctctacttgatgcgcgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system