KEGG   Helicobacter pylori UM032: K747_06365
Entry
K747_06365        CDS       T02658                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hpyr  Helicobacter pylori UM032
Pathway
hpyr03420  Nucleotide excision repair
hpyr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K747_06365
   03430 Mismatch repair
    K747_06365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpyr03400]
    K747_06365
Enzymes [BR:hpyr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K747_06365
DNA repair and recombination proteins [BR:hpyr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K747_06365
   MMR (mismatch excision repair)
    Other MMR factors
     K747_06365
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 AAA_11 Viral_helicase1 AAA_30 DEAD
Other DBs
NCBI-ProteinID: AGL67055
Position
complement(1225522..1227552)
AA seq 676 aa
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIVQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSYISDIGSNTAKDIHEALMLLG
NGDLKLALIQPDKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq 2031 nt   +upstreamnt  +downstreamnt
ttgttagaaactttgcaattaaaccccgagcaactaaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgcaagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtagcgtatcgctatttaaaagagcattaccctaattta
agcctgaagcaacctaaagaattgaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaaaccctacacttcgcagcatctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgactataacgacttactgctgttatttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccgggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacagcataatgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataagcctgcacttttaaattacaacgacaatatcgtgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgcca
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtagcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacatcatggcagcaatccatgttttaagttat
atcagcgatattggctctaacaccgctaaagacattcatgaagctttgatgcttttaggc
aatggcgatctcaaattggctttaattcagcctgataaagaagccaaaatttacacgaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaacagcgtgatagataaagcgtttcattcgcacccggtgttgatgcaccctaaa
atctcactcaatggggccaaaatgcttagcgattttttcattctttataccaaagcccct
acccattcccctagcgctttaatcaaacacattttagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgatccaaaaataaggacggctcttataacgagtttaaa
aaactccaagcacaaaaacgcttcaatgaaaaaatggatttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggctccagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttagaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaaactcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataaa
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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