KEGG   Helicobacter pylori SouthAfrica20: HPSA20_0003
Entry
HPSA20_0003       CDS       T02807                                 
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
hpys  Helicobacter pylori SouthAfrica20
Pathway
hpys00540  Lipopolysaccharide biosynthesis
hpys01100  Metabolic pathways
hpys01250  Biosynthesis of nucleotide sugars
Module
hpys_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    HPSA20_0003 (kdsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:hpys01005]
    HPSA20_0003 (kdsA)
Enzymes [BR:hpys01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     HPSA20_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:hpys01005]
 Lipid A
  HPSA20_0003 (kdsA)
SSDB
Motif
Pfam: DAHP_synth_1 DUF3657
Other DBs
NCBI-ProteinID: AGT73253
UniProt: T1U9Y9
Position
complement(909..1739)
AA seq 276 aa
MNTSNTKTPKSVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQIIKEEFGYKILTDVHESYQASVAAKVADILQIPAFLCRQTDLIVAV
SQTDAIVNIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHIDPKNALSDGANMLKPDELEYLVTDMLKIQNLF
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaacacttctaacacaaaaacccccaaatccgttttaatcgctgggccatgcgtcatt
gagagtttagaaaatctaagaagcatcgctactaaattacaacccctagccaataacgag
cggttggatttttattttaaagcgagttttgataaggctaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcctagaaatgttacaaattatcaaagaggaattt
ggctataaaattttaaccgatgtgcatgagagctatcaagcaagcgtggcagccaaagta
gcggatattttacagatcccggcgtttttgtgccgccaaacggatctgattgtagcagtg
agccagactgacgctattgtcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattctgtcttaaaagcccttaaaacaagagatagtagcattcaaagccccacttat
gaaacggcgttgaaaaatggcgtgtggctgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgctctttaaaaatcatgcgagaatttgcccctgtgattttt
gacgctacccatagcgtgcaaatgccagggggagcgaacgggaaaagttcaggagacagc
tcttttgcccctattttagccagagcggcggctgcggtggggattgatgggttgttcgct
gaaacgcacattgatcctaaaaacgccctaagcgatggagcgaacatgctaaaacctgat
gagttagaatatttagtaaccgacatgttaaaaatccaaaacttattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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