KEGG   Helicobacter pylori SouthAfrica20: HPSA20_0640
Entry
HPSA20_0640       CDS       T02807                                 
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
hpys  Helicobacter pylori SouthAfrica20
Pathway
hpys00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPSA20_0640 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hpys01007]
    HPSA20_0640 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hpys03016]
    HPSA20_0640 (aspS)
   03029 Mitochondrial biogenesis [BR:hpys03029]
    HPSA20_0640 (aspS)
Enzymes [BR:hpys01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     HPSA20_0640 (aspS)
Amino acid related enzymes [BR:hpys01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HPSA20_0640 (aspS)
Transfer RNA biogenesis [BR:hpys03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HPSA20_0640 (aspS)
 Prokaryotic type
   Other AARSs
    HPSA20_0640 (aspS)
Mitochondrial biogenesis [BR:hpys03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPSA20_0640 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d tRNA-synt_2b
Other DBs
NCBI-ProteinID: AGT73878
UniProt: T1UBS2
Position
593342..595075
AA seq 577 aa
MRSHFCTEVSEKDAGKTVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDL
RLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCD
ENDVMGVVEDLLQEVFKATGNSISTPFKRMPYKEAMENYGSDKPDLRFGLPLVEVGDCFM
DSSNAIFSNIAQDSKNKRIKALNVKGADATFSRSVLKELEEFVRQFGAQGLAYLQIKEDE
IKGPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAEMLDLIDKN
ALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDMEEIEAYAYDVVLNGVELGGGSI
RIHKEDMQKKVFERINIDEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTQSHSI
RDVIAFPKTQKASCLLTDAPSSISEEQLRELHIRLRK
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgcgaagtcatttttgcacagaagttagtgaaaaagatgcgggtaaaacagtcaaagtt
gccggctggtgcaacacttatagagaccacggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaattagtgtgtgatcctagctctaaagcttacgaaaaggcttta
gaagtgaggagcgaatttgtgctggtggctaaaggaaaggtgcgtttgaggggcgctggg
ttagaaaaccccaaactaaagaccggaaaaattgaaatcgttttagaagaattagtcatt
gaaaataaaagcgctactccgccaattgaaattggtaataaaaatgtgaatgaagatttg
cgcttgaaataccgctatttggatttacgctctttgagcgcttatgaaatctttaaattg
cgcagcgaagtggctttaattactcgtaacactctagctcaaaaaggctttttagagatt
gaaacccccattttgtctaaaaccacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgaattttttgcccttcctcaaagcccgcaattgttcaaacagctt
ttaatggtggggggaatggacaggtattttcaaatcgctcgttgctttagagatgaagat
ttgagggcggacaggcagccagaattcacgcaaattgatgcagaaatgagtttttgcgat
gaaaatgatgtgatgggcgtggtagaagatttgttgcaagaggtttttaaagcaactgga
aattctatttctacaccttttaaacgcatgccttataaggaagcgatggaaaattacggg
agcgataagccggatttacgctttggattgcctttagtggaagtgggggattgttttatg
gacagctccaacgctattttttctaatatcgcacaagattctaaaaacaaacgcatcaaa
gctttaaacgtcaagggggctgatgcaacttttagccgcagcgttttaaaggaattagaa
gaatttgtgcgccagtttggggctcaaggcttggcgtatttgcaaattaaagaagatgaa
attaaagggcctttagttaaatttttaagcgaaaaggggcttaaaaatattttagaaagg
actaacgcgcaagtaggggatattgtcttttttggcgcaggggataaaaaaatcgtgtta
gattacatggggcgcttgcgcttaaaggtggctgaaatgcttgatctgattgataaaaac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaaccgaaaatggctat
cacgccgcgcaccacccctttacgatgcctaaaaacatagaatgcgaagatatggaagag
attgaagcgtatgcgtatgatgtggtgcttaatggcgtggagcttggcggggggagcatt
aggattcataaagaagacatgcaaaaaaaagtctttgaaaggatcaatattgatgaagag
gaagcgcaaaagaaatttggctttttactagaagcgctaaaatttggcgctcctcctcat
gggggctttgcgataggctttgacagattaatcatgctaatgactcaatctcatagcatt
agagatgtgatcgctttccctaaaacgcaaaaagcttcatgtttattgactgacgctcct
agctccattagcgaagagcaactaagagaattgcacattcgtttaagaaaataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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