KEGG   Helicobacter pylori SouthAfrica20: HPSA20_0678
Entry
HPSA20_0678       CDS       T02807                                 
Name
(GenBank) uracil DNA glycosylase superfamily protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hpys  Helicobacter pylori SouthAfrica20
Pathway
hpys03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPSA20_0678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpys03400]
    HPSA20_0678
Enzymes [BR:hpys01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     HPSA20_0678
DNA repair and recombination proteins [BR:hpys03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HPSA20_0678
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AGT73916
UniProt: T1U962
Position
630002..630631
AA seq 209 aa
MQHSRLQVLRSLYMERLLGETYTNLNLTKPQNKPLNKQVHEGIENCNLCKRYQHSKPVVG
LLNAQSKITFITLTPMLDSQLHFLNNLKALMLESIIQKVFGYSLKDCTILSLLKCDSNSL
NLEEEINACLPHLTWQLDNSASKVIILFGEILLKRLLNLSKEESFGRIVSLKTKNFLSTY
ALEDMLKNPTLKKEAFTHFKIALQFLNRF
NT seq 630 nt   +upstreamnt  +downstreamnt
ttgcaacactcacgccttcaagttttacgctccctttatatggagcgtcttttaggcgaa
acttacactaaccttaatcttacaaaaccccaaaacaagccccttaacaaacaagtccat
gagggcatagaaaattgcaatctatgcaaacgctaccaacattcaaaaccggtagtgggg
cttttaaacgctcaatctaagatcacttttatcacgctcacccccatgctggatagtcaa
ttgcattttttaaacaatttaaaagcgctcatgctagagagcattatccaaaaagtgttt
ggctattctttaaaggattgcacgattttatcgctccttaaatgcgactccaacagcctt
aatttagaagaagaaatcaacgcatgcctgccccatttaacctggcaactagacaacagc
gcttcaaaagtcattatcctgtttggcgagattttgctcaaacgccttttaaacctttct
aaagaagaatcctttgggcgcatcgtgtctttaaaaacaaaaaattttttaagcacctac
gctttagaagacatgctcaaaaaccccacgctcaaaaaagaagcgttcacgcattttaaa
atagcgctccaattccttaatcggttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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