KEGG   Helicobacter pylori 52: HPKB_0063
Entry
HPKB_0063         CDS       T01898                                 
Name
(GenBank) NAD-dependent aldehyde dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hpz  Helicobacter pylori 52
Pathway
hpz00250  Alanine, aspartate and glutamate metabolism
hpz00330  Arginine and proline metabolism
hpz01100  Metabolic pathways
hpz01110  Biosynthesis of secondary metabolites
Module
hpz_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hpz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HPKB_0063
   00330 Arginine and proline metabolism
    HPKB_0063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hpz03000]
    HPKB_0063
Enzymes [BR:hpz01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     HPKB_0063
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     HPKB_0063
Transcription factors [BR:hpz03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    HPKB_0063
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: ACX98696
Position
complement(65693..69250)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESRLKERILKRKNEKIILNVNFIGEEVLGEEEASARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
MKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQSGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHRKIASVHL
ADKGAILKALEVAKSDKSRFSQKSFTEIHALMSQTAQLFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGTLADKPNEKVIKAIGELKSYENYE
IPVSFVNDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMEAQDLDEAIDIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNIHQEEEDENALKNPLSEALEGLIQKGYDEHTHELKRAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTLSTENERANKDL
TFFLECLKALQANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHEQASRLGIVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcattagaattagccaaaaaactgcaagatagcatcagt
aaccatttgagcgagcaagaaaaagcgttccattctaaaatgcaaaagcttttaaataac
cctgaaaacaaagtcatgctcatagagcttatggatcggagttttagatgcttggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcgtttgaaaaattgcttttaatggggtttttgagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaattagaagtgacacaaaagcgatggtcttggat
caagaagagagccgattaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aacgtgaattttattggcgaagaggttttaggcgaagaagaagctagtgcgcgttttgaa
aaatactctcaagccctaaaatccaactacattcaatacatttctattaaaatcacgacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ttagacgctctttatgccctggctttagaagaagaaaaaaagcaaggcatgccgaaattt
attaatttggatatggaggaatttagggatttagagctcacggtggagtcttttatggag
tctatcgctaaatttgatttgaacgctggtattgtgttgcaagcctatatcccggattct
tatgaatatttgaagaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagagactatcgcttct
atgaaagactgggcgttacccacattttctaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatattggcgcagcg
agtcataatatttttgaaatcgcttatgtttatacgcgcatccatgcccttaatgaccct
gttgtgttagagcattttagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcgccggtgtgcgatgaagcacatttt
aacaatgcgatcgcttacttggtgagaagactagatgaaaacacctcaagcgataatttc
atgaaagctttctttaatctcaaagtaggcacgagcgaatggaaagaccaagaacaacgc
tttttaaacagccttaaaggaatcgctactttagacaatgccacccacaggactcaagac
aggaacgccaaacaaagcgggcataccacctacccaaaccattcttttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagaatgggctaaaaaagtgcgcgaaaaaatg
cataacgcccctattttagagctttacccagaaatggatgggaggtttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcatagaaaaatcgctagcgtgcattta
gcggataagggagcgattttaaaagccctagaagtggctaaaagcgataagagccgtttc
agccaaaaaagctttacagaaatccatgccttaatgagtcaaaccgcccagctttttaga
gaaaggcgaggcgacttaatagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgttacaagagcagaataaaaaaacgaaattcacccccaaaggcgtgggtgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacgggttataagctttgt
gagtgcttttgggatgcgggcgtgcctagagatgcgctcatttacttgccctctaaaggg
agcgatattagcgagcatcttttaaaagatgaaagcatcaagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgctagaggctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccacgattgtgagcaaaatggcagacagagatcaagcgattaag
aatgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttagaaaaagaagtttatgaagatgagaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcactctagcagac
aagcctaatgaaaaggtcattaaagccataggcgaattgaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
gaagcgcaagatttagacgaagcgatagacatagtcaattctaccggttacgggctgacg
agcgcgttagagtctttggacgaaagggagtgggaatattatttagagcgcattgaagcc
ggtaatatctatatcaacaagcccaccacaggagcgattgtcttgcgccagccttttggg
ggggttaaaaaatccgctgtggggtttgggaggaaggtaggcatttttaactatatcacg
caatttgtgaatatccaccaagaagaagaagatgaaaacgccctaaaaaaccctttaagc
gaagctttagagggcttgatccaaaaaggctatgatgagcatacgcatgagttgaagcgc
gcgatttttatggcaaagagctacgcttatcattacaagcatgaattcagccaagctaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaaaaggacactttaagcgatatgttaggcgttgctttagcatgt
ttaatttctcaaatccctttaacgctcagcacagaaaacgagcgagcgaacaaagattta
acatttttcttagaatgcttaaaagcgctccaagcaaacgcccctattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaacgctttcaatcgtgtccgttatttaaaaagcgat
ttggatttattgcacgaacaagcaagcagattagggattgttttagccacggccaaaccc
tgcttaaatgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttatgggaatttaggttcaagggttttaaggcaaccaacttgccacaaatca
tgctgtgctgaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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