KEGG   Helicobacter pylori 52: HPKB_0516Help
Entry
HPKB_0516         CDS       T01898                                 

Gene name
gatA
Definition
(GenBank) Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
hpz  Helicobacter pylori 52
Pathway
hpz00970  Aminoacyl-tRNA biosynthesis
hpz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPKB_0516 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpz03029]
    HPKB_0516 (gatA)
Enzymes [BR:hpz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HPKB_0516 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HPKB_0516 (gatA)
Mitochondrial biogenesis [BR:hpz03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPKB_0516 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase
Motif
Other DBs
NCBI-ProteinID: ACX99116
UniProt: D0JZ46
Position
532944..534305
Genome map
AA seq 453 aa AA seqDB search
MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAKGVPILIKDNISVKG
WEVTCSSKILKGYIAPYHASVMENLHQNSMAGFGLSNMDEFAMGSTTESSCYGITKNPRD
KNRVPGGSSGGSAAAVAGGLAVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGLIAY
CSSFDQIGPITQNVEDASILFDAISGHDSKDSTSANLKPTQTFKNLNREKRFKIAILRDH
IKDASNEVQLAYENTLKALKEMGHEIVEKKMLDSHYQISIYYIISMAEASSNLARFDGVR
YGRRAQNVKDLKELYLKSRTEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIKEQ
YNKIFEEVDLIFTPVAPTSAHLFNHHASPLEMYLSDIYTIGANLSGLPALSLPVAKDPLG
LPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD
NT seq 1362 nt NT seq  +upstreamnt  +downstreamnt
atgatcactttaaaacaagccctttctttatcccaagatgaattagaaacccttaaaaac
gaaattgacgctaaggttagagcttcagatttgaacgcttatattaaagcccctagcctt
aatggcgctagcgctaaaggggtgccgatccttattaaagataatatcagcgttaagggg
tgggaagttacttgctccagtaagattttaaaaggctatatcgctccttatcatgcgagc
gtgatggaaaacttgcaccaaaacagcatggcagggtttgggctttctaacatggacgag
tttgcgatgggaagcaccacagagtctagttgctatgggatcactaaaaacccacgagac
aaaaacagagtgcctggagggagtagcggggggagcgcggcagcagtggcaggcggctta
gcggtggcggctttagggagcgatacgggcggatctatcaggcagccggcgagctattgt
gggtgcgtggggttaaagcccacttatgggagggtgagccgttatggtttgattgcgtat
tgttctagttttgatcaaatcgggcctatcacgcaaaatgtggaagacgcttctatttta
tttgacgccattagtgggcatgatagcaaggactccacgagcgccaatctcaaacccacg
caaacctttaaaaaccttaacagagaaaaacgctttaaaatcgctatcttaagagatcac
attaaagatgcgagcaatgaagtgcaactcgcttatgaaaacacccttaaagccttgaaa
gaaatggggcatgagattgtggaaaaaaagatgttagattcgcattatcaaatctctatc
tattatattatcagcatggctgaagcgagttcgaatctggccagatttgatggggttcgt
tatgggaggagggctcaaaatgttaaagatttgaaagagttgtatctcaaaagccgcact
gaaggttttggcgatgaggtgaaacggcgcatcatgctagggaattttgtcttaagcagc
gggtattatgacgcttattatttgaaagcccagcaaatgcgtttgatgattaaagagcaa
tacaacaagatttttgaagaagtggatttgattttcacccctgtagctcccacgagcgct
catttattcaatcaccatgcaagccctttagaaatgtatttgagcgatatttacacgatt
ggggcgaatttgagcggtttgccggccctttctttaccggtcgctaaagatcctttaggc
ttgcccatagggatgcaattcattgctaaggcttttgatgagcaaagccttttagatgtt
tcttacgctttagagcaagaattagatttaaaattagattaa

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