KEGG   Helicobacter pylori 52: HPKB_0686Help
Entry
HPKB_0686         CDS       T01898                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hpz  Helicobacter pylori 52
Pathway
hpz00970  Aminoacyl-tRNA biosynthesis
hpz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hpz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPKB_0686 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hpz03029]
    HPKB_0686 (gatB)
Enzymes [BR:hpz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HPKB_0686 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HPKB_0686 (gatB)
Mitochondrial biogenesis [BR:hpz03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPKB_0686 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Motif
Other DBs
NCBI-ProteinID: ACX99280
UniProt: D0JZL0
Position
complement(710167..711591)
Genome map
AA seq 474 aa AA seqDB search
MPFEAVIGLEVHVQLNTKTKIFCSCSTSFGESPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEANINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKEGTKIVRIER
AHMEEDAGKNIHEGSCSLVDLNRACTPLLEIVTKPDMRNSEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIERQSAAWESGRY
HKEVVQETRLFDTHKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPST
KKIRYMKDFNIKEDDANLLVSDPLLAEYFESMLNLGVKAKTSVTWLCVELLGRLKAETTL
ENCGVSAHMLGVLAKRIDEGKISGKSAKDVLDRLLEEQGGDVDALIEQMGLSQVNDTEAI
VKVIEEVLKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPSVVNAILKEKLD
NT seq 1425 nt NT seq  +upstreamnt  +downstreamnt
atgccatttgaagctgtaatcgggctagaagtccatgtccaactcaacaccaaaaccaaa
atcttttgctcttgctctacaagctttggagaatcccctaattctaacacttgccctgtg
tgtttgggcttaccgggagctttgccggtattgaataaagaagtggttaaaaaagccatc
caattaggcacagccattgaagccaacattaaccaatattccatttttgcgaggaaaaat
tatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccctattgtg
agcgatgggaaattagagattgacaccaaagagggcacaaaaatcgtgcgtattgaaaga
gcccacatggaagaagacgctggtaaaaatatccatgagggcagctgttctttagtggat
ctgaaccgcgcttgcacccctttattagaaattgtcactaagccggacatgcgaaatagt
gaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatttct
gatgcgaacatgcaagaggggaatttcaggtgcgatgcgaatgtatccattagacccaaa
ggcgatgaaaagctttacacgagagtggagattaaaaacttaaatagctttagattcatc
gctaaagcgattgaatacgaaatagagcgccaaagtgcggcgtgggaaagcgggcgttat
cataaagaagtggttcaagaaacgcgcctttttgacacccataaagggatcaccctttct
atgcgcaataaagaagaatcagcggattaccgctattttaaagatccagatttgtatcct
gtttttattgatgaaaagcttttaaaagaagctcaaaagatcaatgaattgcctagcacg
aaaaaaatccgctacatgaaagattttaacattaaagaagacgatgcgaatttattggtg
agcgatcctttattggcggagtattttgaaagcatgctcaatcttggggttaaggctaaa
acgagcgtaacatggctttgcgtggaattattagggcgcttgaaagccgaaaccacttta
gaaaattgcggagttagcgctcacatgttaggcgttttagccaaacgcattgatgagggc
aagatttctggcaagagcgctaaagatgtgttagacaggcttttagaagagcaagggggc
gatgtggatgcactcattgaacaaatgggcttatctcaagtcaatgacaccgaagcgatt
gttaaagtcatagaagaggtgcttaaaaacaacgctgataaggtgcttgaatacaaaagt
ggtaaggacaagctttttgggttttttgtggggcaggcgatgaaaaatttaaaaggcgct
aatcctagcgtggtgaatgctattttgaaagagaaattggattga

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