KEGG   Herbaspirillum rubrisubalbicans: Hrubri_0360
Entry
Hrubri_0360       CDS       T04238                                 
Symbol
nrdA
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb00230  Purine metabolism
hrb00240  Pyrimidine metabolism
hrb01100  Metabolic pathways
hrb01232  Nucleotide metabolism
Module
hrb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
hrb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Hrubri_0360 (nrdA)
   00240 Pyrimidine metabolism
    Hrubri_0360 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrb03400]
    Hrubri_0360 (nrdA)
Enzymes [BR:hrb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Hrubri_0360 (nrdA)
DNA repair and recombination proteins [BR:hrb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Hrubri_0360 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ALU87588
UniProt: A0A0U3CGS4
Position
409108..412089
AA seq 993 aa
MRSTQEISVKSPAPFGVSAEQEGSAEGQSIVSHTAGLGEYRIIRRNGAVVGFEPSKISIA
VTKAFLAVNGGQGAASARVREMVEQLTTSVVSALVRRQPTGGTFHIEDIQDQVELALMRS
GEHDVARAYVLYRAKRMEERAQQGAATKTEVAAPQLHVTEDGQSRPLDINEVRALIAAAC
VGLEAHVDAEAILAETVKNLYDGVPVEELYKSAILAARALMEKDPAYSQVTSRLLMHTIR
KEVFGKEVAQADAPAEYLDYFPHYVKKGIEAELLDTKLAQFDLAKLAAALKPERDLQFGY
IGLQTLYDRYFLHIGGTRIEMPQAFYMRVAMGLALNEIDREARAIEFYDLLSSFDFMSST
PTLFNSGTQRSQLSSCYLTTVADDLDGIYEAIKENALLAKFAGGLGNDWTPVRALGAHIK
GTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFLELRKNTGDDRRR
THDMNTANWIPDLFMKRVMEKGEWTLFSPSDTPDLHDKFGRAFEEAYTAYEAKAARGELK
LFKKVQANDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES
EIAVCNLGSVNLPAHLVNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRP
VGMGIMGFQDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSL
WDRGILPQDSLKLLAQERGGYLETDTTETLDWAALRARIAEHGMRNSNCVAIAPTATISN
IIGVSACIEPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKI
DRIPQDLRDIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWL
RGLKTTYYLRTIGATHTEKSTSRAGALNAVAVDGGAGAMASASGTAVPAAPIASAAASAA
YVMPNPGASIEADGPVCTMRPGDPGFEECEACQ
NT seq 2982 nt   +upstreamnt  +downstreamnt
gtgcgctcaacccaagaaatttccgttaaatcgcccgccccgtttggcgtttccgccgag
caggaaggctccgctgaaggccagtccatcgtctcccataccgcaggcctgggcgaatac
cgcatcatccgccgcaacggcgccgtggtcggtttcgaaccttccaagatttccatcgcc
gtgaccaaggccttcctggccgtcaacggtggtcagggtgcggcctcggcgcgcgtgcgc
gagatggtcgagcaactgaccaccagcgtggtctcggcactggtgcgtcgccagcccacc
ggtggcaccttccatattgaagacatccaggaccaggtcgagctggctctgatgcgttcg
ggcgagcatgacgtggcccgtgcctatgtgctgtaccgcgccaagcgcatggaagagcgt
gcccagcaaggcgccgccaccaagaccgaagtggctgcaccgcaactgcacgtgaccgaa
gacggccagagccgtccgctggacatcaatgaagtgcgcgccctgatcgccgccgcctgc
gtcggcctggaggcgcacgtggatgccgaagccatcctggccgaaaccgtcaagaacctg
tacgacggcgtgcccgtcgaagagctgtacaagtccgccatcctggctgcccgcgcgctg
atggaaaaggaccctgcttacagccaggtgacctcgcgtctgttgatgcacaccatccgc
aaggaagtgttcggcaaggaagtggcccaggctgacgccccggccgagtacctggattac
ttcccgcactatgtaaagaaggggatcgaagccgagctgctcgataccaagctggcccag
ttcgacctggccaagctggctgctgccctcaagcccgagcgcgacctgcagttcggctac
atcggcctgcagacgctatatgaccgttatttcctgcacatcggcggcacccgcatcgag
atgccccaagcgttctacatgcgcgtggcgatgggcctggcactgaacgaaatcgaccgc
gaagcgcgcgccatcgagttctacgacctgctgtcgtccttcgacttcatgagctcgacg
ccgaccctgttcaactcgggcacccagcgttcgcagctgtcctcctgctacctgaccacg
gtggccgacgacctcgacggcatctatgaagccatcaaggaaaacgccctgctggccaag
ttcgccggcggcctgggcaatgactggaccccggtgcgcgccctgggcgcccacatcaag
ggcaccaacggcaagtcgcaaggcgtggtccccttcctgaaggtggtcaacgataccgcc
gtggcagtcaaccagggcggcaagcgcaagggcgcggtctgcgcctacctggaaacctgg
cacatggacatcgaggaattcctcgaactgcgcaagaacaccggcgacgaccgccgccgc
acccacgacatgaacaccgcgaactggattcccgacctgttcatgaagcgcgtgatggaa
aagggcgagtggaccctgttctccccttccgacaccccggacctgcacgacaagttcggc
cgtgccttcgaagaagcctacaccgcctatgaagccaaggctgcccgtggcgagctgaag
ctcttcaagaaggtgcaagccaacgacctgtggcgcaagatgctgtcgatgctgttcgaa
accggccacccgtggatcaccttcaaggatccctgcaacatccgttcgccgcagcagcac
gtcggcgtggtgcacagttccaacctgtgcaccgagatcaccttgaacaccaacgagagc
gaaatcgcggtctgcaacctgggttcggtgaacctgccggcgcacctggtcaatggcgag
ctggaccatgccaagctgcaaaagaccatccgcaccgccatgcgcatgttggacaatgtc
atcgacatcaactactacgccgtcaagaaggcacgtgattccaacctgcgccaccgtccg
gtgggcatgggcatcatgggcttccaggactgcctgcacatcaagcgcgtgccgtacgcc
tcgatggacgccgtcgaattcgccgaccgctccatggaagccgtctgctactacgcctac
atggcctcgaccgaactggctgaagagcgcggccgctacgcttcctaccgcggttcgctg
tgggatcgcggcatcctgccgcaggactccctgaagctgctggcgcaagagcgcggcggc
tacctggaaaccgataccaccgagaccctggactgggccgccctgcgtgcccgcatcgcc
gaacacgggatgcgcaactcgaactgcgtggccatcgccccgacggcgaccatctccaac
atcatcggcgtgtccgcttgcatcgagccgacctaccagaacctgtacgtgaagtcgaac
ctgtcgggcgagttcaccgagatcaacgagtacctggtgcgcgacctgaaggcccgtggc
ctgtgggacgaagtcatggtcgccgacctcaagtatttcgacggcagcctggccaagatc
gaccgcatcccgcaagacctgcgcgacatctacgccaccgccttcgaagtcgatccgtcc
tggctggtggaagccgcctcgcgtcgccagaagtggatcgaccaggcccagtcgttgaac
atctacatggccggtgcttccggcaagcgcctggacgagacctacaagctggcatggctg
cgtggcctcaagaccacctactacctgcgcaccatcggcgccacccacaccgagaagtcc
acttcccgtgcgggtgcactgaacgccgtggccgttgacggcggtgcgggtgcgatggca
tcggcctcgggtacggctgttccggctgcaccgatcgcttcggctgctgcatcggctgcc
tacgtgatgccgaaccccggtgcttcgatcgaagccgatggtccggtctgcaccatgcgt
ccgggcgatccgggcttcgaagagtgcgaggcctgccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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