KEGG   Herbaspirillum rubrisubalbicans: Hrubri_0708
Entry
Hrubri_0708       CDS       T04238                                 
Symbol
fdx
Name
(GenBank) ferredoxin [4Fe-4S]-type protein
  KO
K18979  epoxyqueuosine reductase [EC:1.17.99.6]
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hrb03016]
    Hrubri_0708 (fdx)
Enzymes [BR:hrb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.99  With unknown physiological acceptors
    1.17.99.6  epoxyqueuosine reductase
     Hrubri_0708 (fdx)
Transfer RNA biogenesis [BR:hrb03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Hrubri_0708 (fdx)
SSDB
Motif
Pfam: Fer4_16 QueG_DUF1730 Fer4_10 Fer4_9 Fer4_7 Fer4 Fer4_6 Fer4_2
Other DBs
NCBI-ProteinID: ALU87927
UniProt: A0A0U3AN61
Position
802247..803377
AA seq 376 aa
MSAHTVPVDLADPAFLAALAATIKAWGRELGFAEVRIADVDLAHREAGFQAWLDKGYHGE
MDYMASHGLKRVRPAELVPGTVRVVSVRMPYLPAASQVDAPDWRSREEARSADPAAAQVS
IYARGRDYHKVLRARLQQLATRIEGRIGTFGYRVFTDSAPVMEVALAEKAGLGWRGKHTL
LLHREAGSMFFLGEMLTDLPLPVDAPVSSHCGQCSACITACPTGAIVAPYELDARRCISY
LTIELKGSIPQDLRPLIGNRIYGCDDCQLYCPWNKFAQRASLPDFDPRHGLDSASLVELF
DWSEDQFLKNTEGSAIRRIGHERWLRNLAVGLGNAADASDYRGDVAIVAALRARLDHPSS
LVVEHVRWALARHGIA
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtccgctcataccgtccctgtcgatctggccgatcccgccttcctggcggcactggct
gccaccatcaaggcctggggccgggagctggggtttgccgaggtgcgcatcgccgatgtc
gacctggcgcatcgtgaagcgggcttccaggcctggctggacaagggctaccacggcgag
atggattatatggcaagccacggcctgaaacgtgtacgcccggccgaactggtacccggc
acggtacgcgtggtcagcgtgcggatgccctacctgccggcggccagccaggtcgacgcg
cctgactggcgcagccgggaagaagcccgcagcgccgacccggctgccgcccaggtttcg
atctatgctcgcggacgcgactaccacaaggtcttgcgcgcccgcctgcagcaactggcc
acccgcatcgaaggtcgcatcggtaccttcggctatcgtgtcttcaccgattcggccccg
gtcatggaagtggccctggccgagaaggccgggctgggctggcgcggcaagcacacgctg
ctgctgcaccgggaagctggctccatgttcttcctgggggagatgctgaccgacttgccg
ttgccggtcgatgctcccgtgagttcacattgtggccaatgcagcgcctgcatcacggct
tgcccgactggcgccatcgttgcaccttatgaactggatgcgcggcgttgcatctcctac
ctgaccatcgaactcaagggcagcatcccgcaagacctacggcccctgattggcaaccgt
atctatggttgcgacgactgccagctctactgcccatggaacaagttcgcccagcgcgcc
agcctgcccgacttcgacccgcgccacggactcgacagtgccagcctggtcgagttgttc
gactggagtgaagaccagttcctgaaaaataccgagggcagtgcgattcgccgcatcggt
catgaacgctggctgcgcaatctggccgtgggcttgggcaatgccgccgatgcctccgat
taccggggcgatgtggccatcgtggcagccttgcgtgcgcggctggatcatccctcatcg
ctggtggtcgagcatgtgcgatgggcactggcgcggcacggtatcgcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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