KEGG   Herbaspirillum rubrisubalbicans: Hrubri_0940
Entry
Hrubri_0940       CDS       T04238                                 
Name
(GenBank) dipeptide/oligopeptide/nickel ABC transporter ATPase protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hrubri_0940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hrb02000]
    Hrubri_0940
Transporters [BR:hrb02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Hrubri_0940
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N oligo_HPY AAA_25 nSTAND3 AAA_29 AAA_16 AAA_22 AAA ATP-synt_ab AAA_33 NACHT AAA_23 AAA_5 APS_kinase TsaE Zeta_toxin AAA_24 Sigma54_activat ATPase Mg_chelatase NB-ARC nSTAND1 RsgA_GTPase PRK TIP49 IstB_IS21 Pox_A32 CbiA
Other DBs
NCBI-ProteinID: ALU88156
UniProt: A0A0U3KVS5
Position
1105857..1107794
AA seq 645 aa
MKQFDIFLGKESGAGTGAAAGGATLRPLVEVQGLRVNARKDDGTQVEIVKNVNFTVARGE
VLALIGESGSGKTTIALSLLGYARSGCHIAGGQVRIGQRQIDQMDEKALLAMRGHHVAYI
AQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRALALPNPDHIGARYPHQV
SGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFKNVVKKLGTTAVYVSHDL
AVVAQMADRIIVLRDGAVREIGATEQVLHAPADSYTQSLIAAASPAARVVQLREILPDTV
PAEAKAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLAR
AVAGMIAPARGSIQLDGQQLSPTLEGRTREQFRRVQIVFQNADTALNPAHSIGRILNRPL
SFYHGLKGEAMRRRTAELLDLVKLPSSVLDRLPAELSGGQKQRVNLARALAAKPDLILCD
EVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRPR
EAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGAVDPSPEICAFLPRCSLR
VDGVCNVVPPRRRNMEHGGEILCHRSDADLQQSQTPLVPVEGITV
NT seq 1938 nt   +upstreamnt  +downstreamnt
gtgaagcaattcgatatcttcctcggcaaggaaagcggcgccggcactggcgccgcagcg
ggtggcgcgacgctgcgtccgctggtagaggtccagggcctgcgggtcaatgcacgcaag
gatgacggtactcaggtcgagatcgtcaagaacgtcaacttcaccgtggcgcgtggcgaa
gtgctggccctcatcggtgaatccggttccggcaagaccaccattgcgctctcgctgttg
ggctatgcgcgctccggttgccacatcgccggtggccaggtgcgtatcggtcaacgtcag
atcgaccagatggatgaaaaggccttgctggccatgcgcggccatcacgtggcctacatc
gcccagagtgccgctgcggccttcaacccggcacgcaccttgatggaccaggtcatcgag
agcgccttgcagcatggcgtgatggacaaggccagtgccatgcgcaaggccgtcgaattg
ttccgtgcgctggctctgcccaatcccgatcatatcggggcgcgttatccgcaccaggtc
tccggtggccagttgcagcgcgtaatggcggccatggctctgattaccgacccggaactg
gtgatcctggacgaacccaccacggcgctggacgtgaccacccagatcgaagtgctgcgc
gccttcaagaacgtggtcaagaaactgggcaccactgccgtctacgtctcgcacgacctg
gcggtagtggcgcagatggccgaccgcatcatcgtgctgcgcgatggcgccgtgcgcgag
atcggcgccaccgagcaggtgctgcacgcacccgccgacagctatacccaaagcctgatc
gccgccgcctcgccggctgcgcgcgtggtgcaactgcgcgagatcctgccggacacggtg
ccggccgaagccaaggcaccgctgctgcgcatcagcggcttggtggccggttatggtgcg
ccggatcgcctgggtttgcccggcgtgcgcatcctggacgacatcaatctcaccatccag
cgtggcagcaccgtgggtatcatcggtgagtccggctccggcaagaccaccctggcacgc
gcggtggccggcatgatcgccccggcacgtggcagcatccagctcgatggccagcaactt
tcgccgaccctggaagggcgtacccgcgagcaattccgccgcgtgcagatcgtgttccag
aacgccgataccgccctcaacccggcgcatagcatcggccgtatcctgaaccgtccgctg
tccttctatcacggcttgaaaggcgaggccatgcgccgtcgcacggctgaactgctggac
ctggtcaagctgccttccagcgtgcttgaccgcctgccggccgaactctcgggcggccag
aagcagcgcgtgaacctggcgcgggcgctggcggccaagcccgatctgatcctgtgcgac
gaagtgacctcggccctggataccgtggtggcggctgccatcctggaactgctggccgaa
ctgcggcgcgagttgcaggtgtcctacatgttcatcagccacgacatcagcaccgtgcgc
gccatctgcgacgacatcgtggtgctctatgccggccgcatggtcgccaaccgcccgcgt
gaagccatgatggcgccgccttatcacccgtattcgcacctgctgctgtcgtcggtcccg
gccatgcagcaaggctggctggagcaggtggctggtgctggccagcacaagctgccaccc
atcggcgcggtcgacccgtcgccggagatttgcgccttcctgccgcgctgttcgttgcgc
gtggatggcgtgtgcaacgtggtgccgccgcgccgtcgcaacatggaacatggcggcgag
atcctgtgccaccgttcggacgctgacctccagcagtcgcagacgccgctggtgccggtg
gagggcattaccgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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