KEGG   Herbaspirillum rubrisubalbicans: Hrubri_1735
Entry
Hrubri_1735       CDS       T04238                                 
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase (photoreactivation) protein
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrb03400]
    Hrubri_1735 (phrB)
Enzymes [BR:hrb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Hrubri_1735 (phrB)
DNA repair and recombination proteins [BR:hrb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Hrubri_1735 (phrB)
 Prokaryotic type
    Hrubri_1735 (phrB)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase TRAP-gamma
Other DBs
NCBI-ProteinID: ALU88940
UniProt: A0A0U3KXV5
Position
complement(2015014..2016513)
AA seq 499 aa
MPQFDKSLVWFRRDLRTNDHAALYHALRQSRQVWCVFVFDTDILDALKAEGVQQDRRIDF
LLASVAELDGTLRQAGGGLIVLHGSALRQIPELAAKLQAQAVFINTDYEPLAIERDAAVA
RSLQRQGAQMLSYKDQVIFEKDEVLTQSAKPFSVFTPYKNAWMAKLTAADGAFYLKPYPV
ENYLKALAAPPGEVDHALPSHAQLGFAPSNLHELKISTGMSGAQALLSDFLGRIGAYGTA
RDFPAVKGPSYLSVHLRFGTVSIRALAGAALYLMQNNQGAAGAAVWLSELIWRDFYFMIL
HHHPRVTEQAFKPEYGAIQWEQGPQAEALFAAWCEGRTGYPLVDAAMAQINQSGYMHNRL
RMVVASFLTKDLGIDWRWGEQYFARHLNDFDLAANNGGWQWASSSGCDAQPYFRIFNPVT
QSEKFDPQGKFIRRYLPQLAKLSDKRIHAPWSATPEERLAAGVVLGQNYPRPIVDHALAR
ERTLQRYAVVKKNDRAEQA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgccccaattcgacaagtccctggtctggttccgccgcgatctccgcacgaacgaccac
gccgccctctaccacgcgctcaggcagagccggcaggtgtggtgcgtgttcgtcttcgac
accgacatcctcgatgcactcaaggccgagggtgtacagcaggatagacgcatcgacttc
ctgctggccagcgtggccgagctggatggcacgttgcgtcaagccggaggcggattgatc
gtgctgcatggatcggccctccggcagatccctgagctggccgccaaactgcaagcgcag
gccgtcttcatcaataccgactacgaaccactggccatcgaacgcgacgccgccgtggcg
cgctcgctgcaacgacaaggcgcgcaaatgttgagctacaaggaccaggtgatcttcgag
aaagatgaagtactgacccaatcggccaagcccttttcggtcttcacgccctacaagaat
gcctggatggccaagctgaccgctgccgatggcgcgttctacctgaagccctatccggtc
gagaactacctcaaggccctggccgccccgcccggcgaggttgaccatgccctaccctcg
cacgcgcaactgggctttgcccccagcaatttgcatgaactgaagatttctaccggcatg
tccggtgcgcaggccttgctgtcggacttcctgggccgtatcggggcctatggcacggcg
cgcgatttcccggcagtgaagggtccttcctacctgtcggtgcatctgcggttcggtacc
gtttccatccgcgcgctggcaggtgcggcgctgtatctcatgcagaacaaccagggtgcg
gcgggtgcagccgtgtggctgtcggagctgatctggcgggatttctatttcatgatcctg
caccatcacccgcgcgtgaccgaacaggccttcaagcccgagtatggcgccatccagtgg
gagcaaggcccacaggccgaggcactgtttgccgcctggtgcgaaggccgcaccggctat
ccgctggtcgatgccgccatggcgcagatcaaccagagcggctacatgcacaaccgcctg
cgtatggtagtggccagcttcctgaccaaggacctgggcatcgactggcgctggggtgaa
caatattttgcgcggcatctcaacgacttcgacctggccgccaacaatggcggctggcag
tgggcctcctcctcgggctgcgatgcccagccctacttccgtatcttcaatcccgtcacg
cagtcggagaagttcgacccgcagggcaagttcatccgccgctacctgccgcaactggcg
aaactttccgacaagcgcatccacgcgccctggagcgccacacccgaagaacgtctggca
gccggcgtggtgctggggcagaactatccccgtcccatcgtcgatcatgccctggcgcgc
gagcgcacgctgcaacgttatgcggtggtgaagaagaacgaccgggccgagcaggcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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