KEGG   Herbaspirillum rubrisubalbicans: Hrubri_4004
Entry
Hrubri_4004       CDS       T04238                                 
Name
(GenBank) ABC-type dipeptide transporter, periplasmic peptide-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hrubri_4004
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hrb02000]
    Hrubri_4004
Transporters [BR:hrb02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Hrubri_4004
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ALU91154
UniProt: A0A0U3LK89
Position
complement(4719742..4721364)
AA seq 540 aa
MSNQENERFFSDEFTGAAESGSGIREGFTRRDMMRTLMAGSLLTLGSTSLMAVSSSAMAQ
TPKRGGKLRMATQTSSTADTLDPAKAAHATDYTRVNLFYNGLTKLDSKLGPQMVLAEELL
TTDAITWTVKLRKDVIFHDGKPFTPADVVYSLMRHKDPAVASKVKVVADQIESVKATGPN
EVQIKLAGANADLPVILSTAQFLIIRDGTTEFRTPNGTGAFKCKEFTPGVRTIGVRNENY
WKSGMPYLDEVEVFGIPDEAARVNALLSGDVHWINDVNARSTERVRTSAGYTVIETRTGL
YTDLVIRQDVAPGNSMDFTLGMKYLMDREQIKNAAFRGYAVTANDQPIDPTNRFYFPGLP
QRPYDPDKAKFHLQKAGVLGSTIPLVASAAATGSVDIAVLMQQSAQKIGLKLDVKRVPPD
GYWSNQWMKVPLGFGNINPRPSADILFTQLFKSDAQWNESGWKNAQFDQLLVAARGETDF
NKRKQMYADMQTLVHEKCGIGIPVFIINLEGVNTKVKGITPVPLGAFMNYTCAEYVWLDA
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagtaatcaagaaaacgagcggttcttctccgatgaatttactggcgctgctgagtct
ggaagcggcattcgcgagggcttcacgcgtcgcgatatgatgcgcaccctgatggccggc
agtctcttgacgctgggttcgaccagccttatggcggtgagcagtagcgccatggcacag
acacccaagcgtggcggcaaactccgtatggccacccaaaccagttccactgccgatacg
ctcgatcccgccaaagcggcacacgccactgactacacgcgagtaaacctgttctataac
ggcctgaccaaactcgatagcaagctcggcccgcagatggtgctggccgaagaattgctg
accacggatgccattacctggaccgtcaagttacgtaaggatgtcatttttcacgatgga
aagccgttcaccccggccgacgtcgtgtactcactgatgcgccacaaagatccggctgtc
gcctccaaggtcaaggtcgtggcagatcagatcgagtcagtcaaagccactggccccaat
gaggtgcagatcaaactggccggtgccaatgccgacctgcctgtgatcttgtccacggcg
caattcctgatcatccgagacggtacgaccgaattccgcacgcccaatggaactggggca
ttcaagtgtaaggagttcactccaggagtgcgaaccattggcgtgcgtaatgaaaactac
tggaaatcgggaatgccttatctcgatgaggttgaagtctttggtattcccgatgaagct
gcccgggtcaatgccttgctatcgggcgatgtgcattggatcaatgacgtgaatgcccgt
tcgaccgagcgcgtcaggacgagcgcaggctataccgtgatagaaaccagaacgggtctc
tataccgatctggtcatccgtcaggatgtggcacctggcaatagcatggatttcaccctg
ggaatgaagtatttgatggaccgggagcaaatcaagaacgctgccttccgtggttatgcc
gtgaccgccaatgatcaacctatcgatccgaccaatcgtttctacttccccggtttgccg
cagcgtccttacgacccggacaaggccaagtttcacctgcaaaaggccggcgtcttaggc
agcactatcccgctcgtggcgtcggcagcggctaccggttcggtcgacatcgccgtgctg
atgcagcagagtgctcaaaagatagggttgaaactggatgtgaaacgcgtcccccctgat
ggctattggtcgaaccagtggatgaaggtgccgttgggcttcggcaatatcaatccgcgt
ccaagtgcagacattctgtttacgcagttgttcaagtccgatgcgcaatggaatgaatcg
ggatggaaaaatgcacagtttgatcaattactggtcgccgcacgtggggagaccgatttc
aacaagcgcaaacaaatgtatgccgatatgcagactctcgtgcatgagaaatgcggcatc
ggcatccccgtcttcatcattaacctggaaggcgtcaataccaaggtgaagggcatcact
cccgttccactgggagcattcatgaactacacctgcgcagaatatgtttggttggatgcc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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