KEGG   Herbaspirillum rubrisubalbicans: Hrubri_4414
Entry
Hrubri_4414       CDS       T04238                                 
Name
(GenBank) urea amidolyase
  KO
K01941  urea carboxylase [EC:6.3.4.6]
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb00220  Arginine biosynthesis
hrb00791  Atrazine degradation
hrb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00220 Arginine biosynthesis
    Hrubri_4414
  09111 Xenobiotics biodegradation and metabolism
   00791 Atrazine degradation
    Hrubri_4414
Enzymes [BR:hrb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.6  urea carboxylase
     Hrubri_4414
SSDB
Motif
Pfam: CT_A_B CPSase_L_D2 Biotin_carb_N CT_C_D Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C Biotin_lipoyl_2 ATP-grasp HlyD_3 RimK ATP-grasp_3 ATP-grasp_5 ATPgrasp_Ter
Other DBs
NCBI-ProteinID: ALU91559
UniProt: A0A0U3B0Q5
Position
complement(5176012..5179635)
AA seq 1207 aa
MFDHLLIANRGAIACRILRTLRTLEVTGVCVYSEADLGSLHVLQADRAISLGEGAAAQTY
LAVDKILAAARDSGAQAIHPGYGFLSENAAFAEACEAAGIAFVGPTPAQLRLFGLKHTAR
ALAREQGVPMLEGTGLLENLQEALAAAAQVAYPVMLKSTAGGGGIGMRVCRSDEELVDAF
ESVRRLGQNNFSDAGVFIEKYIERARHLEVQVFGDGQGEVIALGVRDCSVQRRNQKVLEE
TPAPNLPAGMADALCAAAIKLARAVNYRSAGTVEFVYDSQAGQFYFLEVNTRLQVEHGVT
EQVWGVDLVRWMIELAAGELPPLEQLAATLQPSGHAIQARLYAEDPGRQFQPCPGLLTAV
AFPPADGRALRIDTWVEAGCEIPPYFDPMIAKLISWQPTREAARLALDAALEATQLYGVE
TNQHYLRQILADAPFASGQPWTRCLEHLTYHADTVEVLAPGTQTTVQDHPGRIGYWAVGV
PPSGPMDERALRLGNRLLGNASDAAGLEVTMSGPTLRFNTVAVVAVTGADIVVQIDGVVQ
PMHTVLHIAAGSTLKLGVIRGAGARSYLAVRGGLQVPTYLGSRSTFTLGQFGGHGGRALA
TGDILHLAPLAEAAATKVGQALPPGLYPALEPVRKVRVIYGPHGAPEYFTPAYIDTFFAT
DWEVHFNSSRTGVRLIGPKPEWVRDSGGEAGLHPSNIHDNPYAVGAVDFTGDMPVILGPD
GPSLGGFVCPVTVIEADLWQIGQLKAGDKVRFVPVDVAAARRIALAAHQEITALQVQAVA
WAPVALASPIVLDLGHDDRRLVARLSGDANLLLEVGSPQLDLVLRFRVHALIAALEEQAL
PGVIDLTPGIRSLQVHYQPEALPLQRLLDTVAGLWDAVCARQNLTVSSRIVHLPLSWDDP
ACQLAIEKYMTTVRKDAPWCPSNLEFIRRINDLKDLGAVRQTVFDASYLVMGLGDVYLGA
PVATPLDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRY
REVAAFGGKPWLLRFFDQIRFYPVTAEELLTIRRDFPLGRFDLQIEQTQLSLSDYQAFLQ
QEAAGIAAFREHQQAAFDAERQRWIASGQANFEIEEVSAASDQGPPLQAGQMAVDAPIAG
NLWQVKVSPGQRVAQGELLMILESMKMEINIAAPEAGIVAEVRVQPGSPVRAGQCVLVME
ASGQERA
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgtttgaccatctactcattgccaatcgcggcgccatcgcctgccgcatcctgcgcacc
ttgcgcacgctggaggtgaccggcgtgtgcgtctattccgaagccgatctcggcagcctg
cacgtgttgcaggcggaccgtgccatctcgctgggggaaggcgcggccgcccagacctac
ctggcggtggacaagatcctggcggccgcccgcgacagtggtgcccaggccatccatccc
ggctatggcttcctgtccgaaaatgccgcttttgccgaagcctgcgaagcagccgggatt
gccttcgtcggccccactcccgcgcagttgcgcctgttcggcctgaagcatacggcccgc
gccctggcgcgcgagcagggcgtgccaatgctggaaggaacgggcctgctggagaacctg
caagaagcgctggccgctgccgcccaggtcgcttatccggtgatgttgaagagcacggcg
ggcggcggcggcatcggtatgcgcgtctgtcgcagcgatgaagaactggtcgatgccttc
gagtcggtgcgccgactggggcagaacaatttcagcgatgctggcgtgttcatcgaaaaa
tatatcgaacgcgcgcgtcatctggaagtgcaagtcttcggtgatggccagggcgaggtg
atcgcactgggggtacgcgactgctcggtgcagcggcgcaaccagaaggtactggaagaa
acgcccgcccccaacctgcccgcgggcatggccgatgccttgtgcgcagcggccatcaag
ctggcgcgggcggtgaattatcgtagcgccggcacggtggaattcgtctacgacagccag
gcaggacagttctacttcctggaggtcaacacccgcctgcaagtggaacacggcgtgacc
gagcaagtctggggcgtggacctggtacgctggatgatcgaactggcggccggcgaactg
ccaccgctggagcaattggccgccaccctgcaacccagcggccatgcgatccaggcgcgc
ctgtacgcggaagatccgggccgtcagttccagccctgcccgggactgttgacggcagta
gcctttccacccgccgatggccgggccttgcgcatcgatacctgggtcgaagcaggttgc
gagatcccgccttacttcgaccccatgatcgccaagctgatcagctggcaacccacccgc
gaagccgcccggttggcgctcgatgctgcgctcgaagcgacacaactctacggggtggaa
accaaccagcactacctgcgccagatcctggccgatgcacctttcgccagcggccagcca
tggacgcgctgcctggagcacctgacctatcatgccgacacggtggaggtgctggcgccc
ggcacccaaaccacggtgcaggaccatcccggccgcatcggctattgggcggtgggagta
ccaccttcgggcccgatggatgagcgcgcgctgcggctgggcaatcgcctgctgggcaac
gcgagcgacgcggcgggactggaagtgaccatgagcggcccgacgctgcgcttcaacacc
gttgcggtggtggccgtgaccggtgccgatatcgtggtgcagatcgacggcgtggtccag
cccatgcacaccgtcctgcacattgccgcgggcagtacgctcaagctcggtgtcatccgc
ggagccggggcgcgcagctatctggccgtgcgcggcggcctccaagtgccgacctacctg
ggcagccgcagtacctttacgctgggacagttcggcggccatggtggccgggcgctggcc
actggcgatatcctgcacctggcgccgctggccgaggcggccgcgaccaaggtcgggcaa
gcgctgccgccaggcttgtatccggcattggaaccggtacgcaaagtgcgcgtgatctat
gggccgcatggcgcaccggaatatttcacgccggcctatatcgatacctttttcgccacc
gattgggaagtgcacttcaattccagtcgtaccggcgtgcgcctgatcggccccaagccg
gaatgggtacgcgacagtggcggcgaagccggcttgcatccctccaacatccatgacaat
ccctatgctgtgggcgcagtcgatttcacgggcgacatgccggtcatcctcggaccggac
ggtcccagcctgggcggttttgtctgcccggtgaccgtgatcgaagccgacctgtggcag
atcggccagctcaaggccggtgacaaggtccgcttcgtgccggtggatgtggccgccgcg
cgccgcatcgccctggccgcgcaccaggaaatcaccgcgttgcaggtacaggcggtggcg
tgggcgccggtcgcgttggcctcgcccatcgtgctggacctgggccacgacgaccggcgc
ctggtagcgcgcctgtcgggggatgccaatctgctgctggaagtgggcagcccgcaactg
gatctggtgctgcgtttccgcgtccatgccctgatcgccgcattggaagaacaggcgttg
cccggcgtgatcgacctcacccccggcatccgttcgctgcaggtgcattaccagcctgag
gcgctgcccttgcagcggttgctcgataccgtggccgggttgtgggatgcggtctgcgct
cgccaaaacctgacggtttcgtcgcgtatcgtgcatctgcctctgtcctgggacgacccg
gcctgccagctcgccatcgagaaatacatgaccaccgtgcgcaaggatgcaccctggtgt
cccagcaatctcgaattcatccgccgcatcaatgatctcaaggatctcggtgccgtgcgc
cagaccgtgttcgatgccagttatctggtcatgggcctgggcgatgtctacctgggggca
ccggtggccacgccgctggacccgcgccatcgcctggtgaccaccaagtacaacccggcg
cgcacctggacggccgaaaattcggtgggcatcggtggcgcctatctgtgcgtctatggc
atggaaggtccgggcggttaccagttcgtcggtcgcaccctgcagatgtggaaccgctat
cgcgaggtcgcggcctttggtggcaagccctggctgctgcgcttctttgaccagatccgt
ttctacccggtcacagccgaggagttgctgaccatccgccgcgattttcccttgggtcgc
ttcgatctgcagatcgaacagacccaattgagtctctcggattaccaggctttcctgcag
caggaggccgcgggcatcgccgccttccgcgagcaccagcaagccgccttcgatgccgag
cggcagcgctggatcgccagtggccaggccaacttcgagatcgaggaagtcagcgccgcc
agtgatcaggggccgcctctgcaagcggggcagatggcagtggatgcgccgattgccggc
aacctgtggcaggtcaaggtcagtccggggcagcgcgtggcgcagggggaactgttgatg
atcctggagtcgatgaagatggaaatcaatattgccgcgcccgaggccggcattgtcgcc
gaggtgcgcgtgcagcccggcagcccggtgcgcgcggggcaatgcgtgctggtgatggaa
gccagcgggcaggagcgcgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (32)   

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