KEGG   Helobdella robusta: HELRODRAFT_192740
Entry
HELRODRAFT_192740 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14284  nuclear RNA export factor
Organism
hro  Helobdella robusta
Pathway
hro03008  Ribosome biogenesis in eukaryotes
hro03013  Nucleocytoplasmic transport
hro03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    HELRODRAFT_192740
   03015 mRNA surveillance pathway
    HELRODRAFT_192740
   03008 Ribosome biogenesis in eukaryotes
    HELRODRAFT_192740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_192740
   03009 Ribosome biogenesis [BR:hro03009]
    HELRODRAFT_192740
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     HELRODRAFT_192740
   mRNA cycle factors
    Stress granule specific factors
     HELRODRAFT_192740
Ribosome biogenesis [BR:hro03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    HELRODRAFT_192740
SSDB
Motif
Pfam: Tap-RNA_bind NTF2 LRR_9 LRR_8 LRR_4
Other DBs
NCBI-GeneID: 20212386
NCBI-ProteinID: XP_009021889
JGI: Helro1_192740
UniProt: T1FU90
Position
Unknown
AA seq 484 aa
MSRKCLRIVTRDGLRHIENSNRLGRVTFKNSSRGNNFRSFSNHPVSLLKLMEDDVSMEGG
SSSGLNNNNNNNNNNYNNNNNYNNNYRGRGRGSYRGGRGGGGSGGGARSNNEIPFSKSGW
YKITIPHAKDLDKDFIIKSINGLLKTPMMPWNFSYENKMATFNIKGTEEARAVKGVSKRI
TTPNGFKMIILVGPCAMPPTDINSAVVEKMKIVMSRRYKAEMFFLDLSSFAKDPEFLSQN
INLMMMRPKVINNVLDIIAQNIPEIKVLDLSDNELNGLGILSTLSEKAPNLMSLNLAKNR
LTSESDLISIKKLKLEEIMLEGNPLQQRFKDKQLYIRAVRQKFPNVLRLDGQTLPPPINF
NVEPTELPTTKGNYFDDDVIRAQVCLFIEQYYSLYDNGNREGLAGAYHDQAIFSVSAFFN
RTQITNQSNLSEYIKISHNLKRIEDREKLLRVRSGREEIISTLKKLPPTNHDPNSFVVDV
VHVD
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcgcgaaaatgtcttcgaatcgttacgagggatggcttgagacacatcgaaaatagt
aacagacttggtcgagtgacattcaaaaactcgtccagaggcaataattttcgaagtttc
agcaaccacccagttagccttttaaaacttatggaagacgatgtctccatggaaggtggc
agcagtagtggtctgaacaacaacaacaataacaataataataattataataataataat
aattataataataattatagaggtcgaggtagaggaagctacagagggggtcgaggagga
ggaggaagtgggggtggagccagatctaacaatgaaattccattctcaaaatcaggatgg
tacaaaattactataccacacgccaaggacctggacaaagatttcataataaaatccatc
aatggcctactgaagacacctatgatgccgtggaatttctcttatgagaacaagatggcc
actttcaacataaaaggcacagaggaggccagggctgtaaaaggagtcagcaaaagaatt
acaactcctaacggctttaagatgataatattggtgggaccgtgtgctatgccgcctacg
gatatcaactctgctgttgttgaaaagatgaaaattgttatgagccggaggtataaagcc
gaaatgttctttctggatctctcttcatttgctaaagaccctgaatttctgagccaaaac
atcaacctgatgatgatgaggcctaaagttataaacaatgtattggacatcatcgcacag
aatattccagagattaaagtgttagatttaagtgacaacgagttgaatggattaggaatt
ctatccacattatcagaaaaagctccaaatttgatgtcgctaaatttagctaaaaacaga
ctgacttcagagtcagacctcattagcataaagaagctgaaactggaggagataatgttg
gagggaaatccattgcagcagagattcaaagacaaacaactgtacatacgtgctgtcagg
cagaaattcccaaatgttctaagattggacggacagaccctacctccacctatcaatttt
aacgtcgagcctaccgaacttcccaccactaagggtaattatttcgacgatgacgtcatc
agggctcaagtctgcctcttcattgaacagtactacagcttgtatgacaacggaaatagg
gaaggcttagctggagcttaccatgatcaagctattttctctgtatcagctttcttcaat
aggacccaaatcacgaaccaatcaaacttatcagagtacataaagatcagtcacaattta
aagaggattgaagaccgagagaagttactgcgagttagatcagggcgggaggaaataatc
agcacgttaaaaaaacttccaccgaccaatcacgatccaaattcattcgttgttgatgtt
gtccatgttgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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