KEGG   Helobdella robusta: HELRODRAFT_193180
Entry
HELRODRAFT_193180 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
hro  Helobdella robusta
Pathway
hro03250  Viral life cycle - HIV-1
hro04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    HELRODRAFT_193180
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    HELRODRAFT_193180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hro04131]
    HELRODRAFT_193180
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_193180
Membrane trafficking [BR:hro04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    HELRODRAFT_193180
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    HELRODRAFT_193180
SSDB
Motif
Pfam: Vps4_C AAA MIT TIP49 AAA_lid_3 AAA_17 AAA_14 AAA_5 AAA_22 IstB_IS21 AAA_18 AAA_16 RuvB_N AAA_25 DUF815 AAA_2 AAA_33 AAA_24 RNA_helicase Tae4 Mg_chelatase DUF5906 nSTAND3 AAA_28 Sigma54_activ_2 bpMoxR AAA_7 PhoH
Other DBs
NCBI-GeneID: 20212545
NCBI-ProteinID: XP_009024149
JGI: Helro1_193180
UniProt: T1FUP9
Position
Unknown
AA seq 363 aa
MSTALQKGIEFVTKATEEDKVKNYEEALKLYEHGVEYFLHAIKYEAHNEKAKENLRTKCG
QYLERAEKLKEYIRSKEKKPVKANGGKKSDSDSDSDSNDAEKKKMKGKLSGAIVMDKPNI
KWDDVAGLEGAKEALKEAVILPIKFPHLFTGKRKPWKGILLFGPPGTGKSYLAKAVSTET
GNSTFFSISSSDLMSKWLGESEKLVKNLFELARQHRPSIIFIDEVDSMCSSRNDNDSEAN
RRIKTEFLVQMQGRFSGADISIVVRDALMEPVRKVQSATHFKKVRGESPINKGVIVDDLL
TPCSPGDPGAIEMSWMDVPGEKLLEPILNMSDMMRSLQNSKPTVNDDDLKKLRKFTEEFG
QDG
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtcgaccgctctacagaaaggtatagagtttgtgacaaaagcaacagaagaagataag
gtaaaaaattatgaagaagccctgaagctatatgaacatggggtggaatatttcctacat
gccattaaatatgaggcccacaatgaaaaagccaaagaaaacctaagaaccaagtgcggc
cagtacttggagagggcagaaaagctgaaagagtacatcaggagtaaggagaagaaacct
gtcaaggctaatggcggcaaaaagtctgacagcgacagtgatagcgactccaatgacgcc
gagaagaaaaaaatgaagggcaagctgtcaggagccatagttatggacaagcctaacatt
aagtgggatgacgtagccgggctggaaggtgctaaggaggccctgaaggaagccgtcata
ctgccaatcaagtttccacatctctttactggcaagcgaaagccatggaaagggatatta
ctttttggaccgccaggtaccggaaagtcctacctggcaaaggcagtgtccacagagact
ggcaactctactttcttctcgatatcatcatctgatctcatgtcgaaatggcttggtgag
agtgagaaattagttaaaaacctgtttgagttggctcgccagcatcggccaagcatcatc
ttcatcgatgaggttgactcaatgtgctcctctaggaatgataacgactcggaggccaac
agaaggatcaagacggagttcctcgttcaaatgcaaggtcggttctcaggggcagacatc
agtatcgtcgtgagggatgcattgatggagcctgttagaaaagtacagagtgccacacat
ttcaaaaaggttagaggtgagagcccaataaataaaggtgtcatagttgatgacctattg
accccatgttctcccggtgaccccggcgctattgagatgagttggatggatgttcctgga
gagaaattgttggagcccattcttaatatgtctgacatgatgagatcattgcagaattcc
aagccaacagtcaatgatgacgacctaaagaagttgaggaaattcactgaggaattcgga
caagatggatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (86)   

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