KEGG   Helobdella robusta: HELRODRAFT_86309
Entry
HELRODRAFT_86309  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
hro  Helobdella robusta
Pathway
hro03020  RNA polymerase
hro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HELRODRAFT_86309
  09124 Replication and repair
   03420 Nucleotide excision repair
    HELRODRAFT_86309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hro03021]
    HELRODRAFT_86309
   03400 DNA repair and recombination proteins [BR:hro03400]
    HELRODRAFT_86309
Transcription machinery [BR:hro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HELRODRAFT_86309
  RNA polymerase III system
   RNA polymerase III
     HELRODRAFT_86309
  RNA polymerase I system
   RNA polymerase I
     HELRODRAFT_86309
DNA repair and recombination proteins [BR:hro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HELRODRAFT_86309
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF4549 Tlp
Other DBs
NCBI-GeneID: 20216599
NCBI-ProteinID: XP_009026033
JGI: Helro1_86309
UniProt: T1G6A2
Position
Unknown
AA seq 126 aa
FDGDFDGDFDEMEDDVQDEIENVEESQENIEIIDSTQEQSSLKVDPEKRMTTPYMTKYER
ARVLGTRALQIAMCAPVMVELEGEIDPLAIAMKELKARKIPIIIRRYLPDGSYEDWAIDE
LIITDI
NT seq 381 nt   +upstreamnt  +downstreamnt
tttgatggagacttcgacggcgattttgatgaaatggaagatgacgtccaggatgagatt
gagaatgtcgaggagagccaggagaacattgaaataattgattcaacgcaggagcaatca
tcgctgaaagtcgatccagagaaaaggatgacgacaccctacatgactaaatatgaaagg
gccagagtccttgggacgagagctctacaaattgcgatgtgcgcgccggtgatggtcgaa
ctggaaggtgaaattgatcccctggcaattgcaatgaaggaattgaaggcaaggaagatt
ccgatcatcatcaggaggtaccttccagatggctcctatgaggactgggctatcgacgaa
ctcatcatcacggacatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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