KEGG   Hymenobacter sp. BT18: HER32_03680
Entry
HER32_03680       CDS       T06970                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
hrs  Hymenobacter sp. BT18
Pathway
hrs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hrs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HER32_03680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrs03019]
    HER32_03680
Enzymes [BR:hrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     HER32_03680
Messenger RNA biogenesis [BR:hrs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HER32_03680
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: QIX60333
Position
complement(890441..891871)
AA seq 476 aa
MKLPQLPELPLFHTIADAAGALGYPAYVIGGFVRDLALERPSKDVDVVCVGDGIRLAQAV
GQRLPSRPRVTVFKNFGTAMLPTPEVEIEFVGARKESYRAESRKPEVEAGTLEEDLARRD
FTINALGLSLNPEDFGALVDRYDGIGDLRRKIIRTPLDPDITFSDDPLRMMRAVRFAAQL
NFDIEPDTFDAIARNKERIKIVSQERITDELNKLILAPKPSYGFKLLFSSGLLQLIFPRM
AQLQGVEKRGQHAHKDNFYHTLQVLDNVAEAGGDLWLRWAAILHDIAKPATKRFDPRVGW
TFHGHEDKGARWTPAIFTDLKLPLGEEMRQVQKLVRLHLRPIALVKETVTDSAVRRLLFE
AGDEIDRLMLLCKADITSKDHQRVARYLRNFERVEEKLKEVEEKDHLRNFKPVITGEVIM
QTFGLKPSREVGELKEAVLEAILDGKIRNEYEEAFAFLLQQGQAKGLPQGHHSLTK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaaacttccccagcttcccgagttacccttgttccataccattgccgacgcggccggt
gcgctgggctaccccgcctacgtgattgggggcttcgtgcgcgacctggccctggagcgc
cccagcaaagatgtggacgtggtgtgcgtgggcgacggtatccggctggcccaggccgtg
gggcagcggctgccttcccggccccgcgtgacggtattcaagaacttcggcacggccatg
ctccccaccccggaggtggaaattgagtttgtgggcgcccgcaaagaaagctaccgggcc
gagagccgcaagcctgaggtggaagccggcaccctggaagaagacctggcccgccgcgac
tttaccatcaacgccctgggcctgagcctcaatcccgaagactttggggccctcgtagac
cgctacgacggcataggcgacctgcgccgtaaaatcatccgcacgcccctcgaccccgac
attactttttccgacgacccgctgcgcatgatgcgggccgtgcgctttgccgcccagctc
aacttcgatatcgagcccgataccttcgatgccattgcccgcaacaaggagcgcatcaag
attgtgtcgcaggagcggataaccgacgagctgaacaagctgattctggctcccaagcct
agctacggcttcaagctgctgtttagctcggggctgcttcagctgatttttccgcgcatg
gcccagctgcagggcgtggaaaagcgcgggcagcacgcccacaaagacaatttctaccac
accctgcaggtgctcgacaacgtggccgaagctggcggcgacctgtggctgcgctgggct
gctattctgcacgacattgctaagcccgccaccaagcgcttcgacccccgggtaggctgg
accttccacggccacgaagacaaaggcgcccgctggacgcctgccatcttcaccgatttg
aaattgccgctgggggaagaaatgcgccaggtacagaagctggtgcgcctgcacctgcgg
cccattgccctggtaaaggaaaccgtaacggactccgccgtgcgccgtctgctcttcgag
gccggcgacgaaatagatcggctgatgctcctctgcaaggctgatatcaccagcaaagac
caccagcgcgtggcgcgctacctgcgcaacttcgagcgggtggaggaaaagctgaaggag
gtagaggagaaagaccacctacgcaacttcaagcccgtgattaccggggaagtgattatg
cagacgtttgggctgaagccttcccgggaagtgggcgagctgaaggaagccgtgctggaa
gccattctggatggcaagattcgaaacgagtatgaggaagcctttgccttcctgttgcag
cagggtcaggccaaagggcttcctcaggggcatcactcactcaccaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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