KEGG   Homo sapiens (human): 6875
Entry
6875              CDS       T01001                                 
Symbol
TAF4B, SPGF13, TAF2C2, TAFII105
Name
(RefSeq) TATA-box binding protein associated factor 4b
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
hsa05016  Huntington disease
Disease
H01282  Spermatogenic failure
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    6875 (TAF4B)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    6875 (TAF4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    6875 (TAF4B)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6875 (TAF4B)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     6875 (TAF4B)
   Coactivators
    SAGA/TFTC/STAGA complex
     6875 (TAF4B)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     6875 (TAF4B)
SSDB
Motif
Pfam: TAF4 TAFH E2F_CC-MB
Other DBs
NCBI-GeneID: 6875
NCBI-ProteinID: NP_005631
OMIM: 601689
HGNC: 11538
Ensembl: ENSG00000141384
UniProt: Q92750
Position
18:26226445..26391685
AA seq 862 aa
MPAGLTEPAGAAPPAAVSASGTVTMAPAGALPVRVESTPVALGAVTKAPVSVCVEPTASQ
PLRSPVGTLVTKVAPVSAPPKVSSGPRLPAPQIVAVKAPNTTTIQFPANLQLPPGTVLIK
SNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKICTVPNSSSQLIKKVAVTPVKK
LAQIGTTVVTTVPKPSSVQSVAVPTSVVTVTPGKPLNTVTTLKPSSLGASSTPSNEPNLK
AENSAAVQINLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEA
EEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTSSDMVIATCTTT
VTTSPVVTTTVSSSQSEKSIIVSGATAPRTVSVQTLNPLAGPVGAKAGVVTLHSVGPTAA
TGGTTAGTGLLQTSKPLVTSVANTVTTVSLQPEKPVVSGTAVTLSLPAVTFGETSGAAIC
LPSVKPVVSSAGTTSDKPVIGTPVQIKLAQPGPVLSQPAGIPQAVQVKQLVVQQPSGGNE
KQVTTISHSSTLTIQKCGQKTMPVNTIIPTSQFPPASILKQITLPGNKILSLQASPTQKN
RIKENVTSCFRDEDDINDVTSMAGVNLNEENACILATNSELVGTLIQSCKDEPFLFIGAL
QKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAIAQHRMTTYKASENYILCS
DTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQ
IQHRDANLTALAAIGPRKKRPLESGIEGLKDNLLASGTSSLTATKQLHRPRITRICLRDL
IFCMEQEREMKYSRALYLALLK
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgcccgccggcctcaccgaacccgccggcgccgctcccccggctgctgtgagcgcctcg
gggaccgtgaccatggccccggccggggcgctgccggtgcgggtggagagcactccggtg
gccctgggcgccgtgactaaggctcctgtcagcgtctgcgtggagcccacggcgtcccag
cccctgcggtcccccgtggggaccctggtgaccaaagtggctccggtcagcgcccctcct
aaagtcagcagcggccctaggctgcctgctcctcagatagtcgccgtgaaagcccccaac
accacgacaatccagtttcctgctaatttgcagcttcctccaggaaccgttttgattaaa
agtaacagtggtccgttgatgttggtatctcctcagcaaactgtaacaagagccgagacc
acaagtaacataacctcaaggccagcagtaccagcgaatcctcaaacagtcaaaatctgt
acagtgccgaactctagctcacaattaatcaagaaagtggcagtgacacctgttaaaaaa
ttggcacaaataggaactactgtggtaaccactgttccgaagccttcctcagtacaatct
gtggctgtgccaaccagtgtcgtcacagttactcctggaaagccattgaatactgtaact
accctgaagccttcaagtttgggagcatcatccactccttcaaatgagcccaatcttaaa
gcagagaactcagcagctgttcagattaatctttctccgacaatgctagaaaatgtgaag
aaatgcaagaacttccttgcaatgttaataaaactagcatgtagtggatcacagtcccca
gaaatggggcaaaatgtgaagaagctggtggaacaacttttggatgcaaaaatcgaagca
gaagaatttactaggaaactgtatgttgaactcaagtcttcacctcagcctcacctggtt
ccttttcttaagaaaagcgtggttgccttacgacaacttctgcctaactcccagagcttc
atccagcaatgtgttcagcagacttctagtgacatggtcattgctacctgtactacaaca
gtaacaacttctcctgtggtgacaactacagtgtcctcaagccagtctgaaaagtcaatt
attgtttctggagcaacagcacccagaactgtgtcagtgcaaactttgaacccacttgct
ggtccagtgggagcaaaagctggagttgtgacacttcattctgtgggcccaactgctgca
acaggaggaacaacagctggaactggtttgcttcagacttcaaaaccacttgtgacatct
gtggcaaacacagtgaccacggtctcactgcaacctgaaaagccagttgtctctggaaca
gcagtaacactgtcccttccagcagtaacttttggagaaacttcaggtgcagctatttgt
cttccatctgtgaaacctgttgtttcttctgctgggaccacatctgacaagcctgttatt
gggactccagttcaaatcaaacttgcccagccgggccctgtcctttcacaaccagctggg
attccacaggcagttcaagtcaagcaactagtagttcagcagccttcaggaggcaatgaa
aaacaagtgaccacaatttcacattcctcaacattgaccattcagaaatgtggacagaag
acgatgccagtgaacaccataatacctactagtcagtttcctccagcttccattctaaag
caaattactctgcctggaaataaaattctgtcacttcaagcatctcctactcagaaaaat
agaataaaagagaatgtaacatcatgcttccgagatgaggatgacatcaatgatgtgact
tctatggcaggggtcaaccttaatgaagaaaatgcctgcatcttagcaacaaactctgaa
ttggttggcacactcattcagtcatgtaaagatgaaccatttctttttattggagctcta
caaaagagaattttagacattggtaaaaagcatgacattacagaacttaactctgatgct
gtgaacttgatctcccaagcaacacaggaacgactacgaggccttctagaaaaactgact
gcaattgctcagcatcgaatgactacttacaaggcaagtgaaaattacatcctgtgtagt
gataccaggtcacagctcaaatttcttgaaaagctggatcaattggagaagcagagaaag
gatttggaagaaagagaaatgttacttaaggcagccaagagtcgttctaataaagaagat
ccagaacagctgagattaaagcagaaagccaaagagttacagcaattggaacttgcacag
atacagcatagagacgctaatctcacagctcttgcagctattggaccaaggaagaagaga
ccactagaatctggaattgagggcttaaaagacaaccttcttgcttctgggacatccagc
ctgacagccaccaaacagttgcatcgtccaagaatcacgagaatctgcctcagggacttg
atattttgtatggaacaggaacgggagatgaagtattctcgagctctatacctggccctt
ctgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (26)   
   RefSeq(nuc) (12)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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