KEGG   Homo sapiens (human): 1300Help
Entry
1300              CDS       T01001                                 

Gene name
COL10A1
Definition
(RefSeq) collagen type X alpha 1 chain
  KO
K19479  collagen, type X, alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04974  Protein digestion and absorption
Disease
H00479  Metaphyseal dysplasias
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    1300 (COL10A1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Collagen C1q BclA_C
Motif
Other DBs
NCBI-GeneID: 1300
NCBI-ProteinID: NP_000484
OMIM: 120110
HGNC: 2185
Ensembl: ENSG00000123500
Vega: OTTHUMG00000015426
Pharos: Q03692(Tbio)
UniProt: Q03692
Structure
PDB: 

Position
6q22.1
AA seq 680 aa AA seqDB search
MLPQIPFLLLVSLNLVHGVFYAERYQMPTGIKGPLPNTKTQFFIPYTIKSKGIAVRGEQG
TPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGER
GPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPG
VPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFP
GEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGK
PGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGP
KGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGL
PGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGI
ATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLV
SANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFS
YHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESN
GLYSSEYVHSSFSGFLVAPM
NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt
atgctgccacaaataccctttttgctgctagtatccttgaacttggttcatggagtgttt
tacgctgaacgataccaaatgcccacaggcataaaaggcccactacccaacaccaagaca
cagttcttcattccctacaccataaagagtaaaggtatagcagtaagaggagagcaaggt
actcctggtccaccaggccctgctggacctcgagggcacccaggtccttctggaccacca
ggaaaaccaggctacggaagtcctggactccaaggagagccagggttgccaggaccaccg
ggaccatcagctgtagggaaaccaggtgtgccaggactcccaggaaaaccaggagagaga
ggaccatatggaccaaaaggagatgttggaccagctggcctaccaggaccccggggccca
ccaggaccacctggaatccctggaccggctggaatttctgtgccaggaaaacctggacaa
cagggacccacaggagccccaggacccaggggctttcctggagaaaagggtgcaccagga
gtccctggtatgaatggacagaaaggggaaatgggatatggtgctcctggtcgtccaggt
gagaggggtcttccaggccctcagggtcccacaggaccatctggccctcctggagtggga
aaaagaggtgaaaatggggttccaggacagccaggcatcaaaggtgatagaggttttccg
ggagaaatgggaccaattggcccaccaggtccccaaggccctcctggggaacgagggcca
gaaggcattggaaagccaggagctgctggagccccaggccagccagggattccaggaaca
aaaggtctccctggggctccaggaatagctgggcccccagggcctcctggctttgggaaa
ccaggcttgccaggcctgaagggagaaagaggacctgctggccttcctgggggtccaggt
gccaaaggggaacaagggccagcaggtcttcctgggaagccaggtctgactggaccccct
gggaatatgggaccccaaggaccaaaaggcatcccgggtagccatggtctcccaggccct
aaaggtgagacagggccagctgggcctgcaggataccctggggctaagggtgaaaggggt
tcccctgggtcagatggaaaaccagggtacccaggaaaaccaggtctcgatggtcctaag
ggtaacccagggttaccaggtccaaaaggtgatcctggagttggaggacctcctggtctc
ccaggccctgtgggcccagcaggagcaaagggaatgcccggacacaatggagaggctggc
ccaagaggtgcccctggaataccaggtactagaggccctattgggccaccaggcattcca
ggattccctgggtctaaaggggatccaggaagtcccggtcctcctggcccagctggcata
gcaactaagggcctcaatggacccaccgggccaccagggcctccaggtccaagaggccac
tctggagagcctggtcttccagggccccctgggcctccaggcccaccaggtcaagcagtc
atgcctgagggttttataaaggcaggccaaaggcccagtctttctgggacccctcttgtt
agtgccaaccagggggtaacaggaatgcctgtgtctgcttttactgttattctctccaaa
gcttacccagcaataggaactcccataccatttgataaaattttgtataacaggcaacag
cattatgacccaaggactggaatctttacttgtcagataccaggaatatactatttttca
taccacgtgcatgtgaaagggactcatgtttgggtaggcctgtataagaatggcacccct
gtaatgtacacctatgatgaatacaccaaaggctacctggatcaggcttcagggagtgcc
atcatcgatctcacagaaaatgaccaggtgtggctccagcttcccaatgccgagtcaaat
ggcctatactcctctgagtatgtccactcctctttctcaggattcctagtggctccaatg
tga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (15)   
   RefSeq(nuc) (5)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system