KEGG   Homo sapiens (human): 1306
Entry
1306              CDS       T01001                                 
Symbol
COL15A1
Name
(RefSeq) collagen type XV alpha 1 chain
  KO
K08135  collagen type XV alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04974  Protein digestion and absorption
Network
nt06546  IgSF CAM signaling
  Element
N01946  PTPRF interactions
N01947  PTPRS interactions
N01948  PTPRD interactions
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    1306 (COL15A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:hsa00535]
    1306 (COL15A1)
Proteoglycans [BR:hsa00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   1306 (COL15A1)
SSDB
Motif
Pfam: Endostatin Collagen Collagen_trimer Laminin_G_3
Other DBs
NCBI-GeneID: 1306
NCBI-ProteinID: NP_001846
OMIM: 120325
HGNC: 2192
Ensembl: ENSG00000204291
UniProt: P39059 B3KTP7
Structure
Position
9:98943907..99070787
AA seq 1388 aa
MAPRRNNGQCWCLLMLLSVSTPLPAVTQTRGATETASQGHLDLTQLIGVPLPSSVSFVTG
YGGFPAYSFGPGANVGRPARTLIPSTFFRDFAISVVVKPSSTRGGVLFAITDAFQKVIYL
GLRLSGVEDGHQRIILYYTEPGSHVSQEAAAFSVPVMTHRWNRFAMIVQGEEVTLLVNCE
EHSRIPFQRSSQALAFESSAGIFMGNAGATGLERFTGSLQQLTVHPDPRTPEELCDPEES
SASGETSGLQEADGVAEILEAVTYTQASPKEAKVEPINTPPTPSSPFEDMELSGEPVPEG
TLETTNMSIIQHSSPKQGSGEILNDTLEGVHSVDGDPITDSGSGAGAFLDIAEEKNLAAT
AAGLAEVPISTAGEAEASSVPTGGPTLSMSTENPEEGVTPGPDNEERLAATAAGEAEALA
SMPGEVEASGVAPGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASG
VPTDGLAPLTATMAPERAVTSGPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPT
VAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGAEAEGSGLGWG
SDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGEDGPAGEPGPP
GPEGQPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKKGQAGPPGVMGPP
GPPGPPGPPGPGCTMGLGFEDTEGSGSTQLLNEPKLSRPTAAIGLKGEKGDRGPKGERGM
DGASIVGPPGPRGPPGHIKVLSNSLINITHGFMNFSDIPELVGPPGPDGLPGLPGFPGPR
GPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLERLMGKKGEPGMHGAPGPMGPKGPPG
HKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIKGAIFPIP
VRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPLDLAYLR
HFLNNLKGENGDKGFKGEKGEKGDINGSFLMSGPPGLPGNPGPAGQKGETVVGPQGPPGA
PGLPGPPGFGRPGDPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSN
MDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIPADSPPPPALSSNPHQ
LLPPPNPISSANYEKPALHLAALNMPFSGDIRADFQCFKQARAAGLLSTYRAFLSSHLQD
LSTIVRKAERYSLPIVNLKGQVLFNNWDSIFSGHGGQFNMHIPIYSFDGRDIMTDPSWPQ
KVIWHGSSPHGVRLVDNYCEAWRTADTAVTGLASPLSTGKILDQKAYSCANRLIVLCIEN
SFMTDARK
NT seq 4167 nt   +upstreamnt  +downstreamnt
atggcaccaaggaggaacaacgggcagtgctggtgtctgctgatgctgctctcggtctcc
acgcccctccctgctgtcacccagacccgcggtgcgacagagactgcttcccagggtcac
ctggacctcacgcagctcatcggtgtcccgctgccctcgtccgtatcctttgtcacaggc
tatggtggcttcccggcctacagtttcgggcctggtgccaatgttggccgcccagccagg
actctcatcccatccaccttcttcagggacttcgccatcagcgtcgtggtgaagcccagc
agcacccgtggtggcgtgctcttcgccatcactgacgccttccagaaggtcatctacctg
ggcctgcggctctcaggtgtggaggacggccaccagcggatcatcctctactacacggag
ccaggctcccatgtgtcccaagaggctgctgccttctcggtgcctgtgatgacccacagg
tggaaccgcttcgccatgattgtccagggtgaggaagtgaccctcctcgtgaactgtgag
gagcacagccgcatccccttccagcggtcctcccaggctttggcttttgagtccagcgct
ggaatcttcatgggcaatgcaggagctacagggctcgagagattcactggctccctccag
cagctcaccgtgcaccccgaccccaggactcccgaggagctgtgtgaccctgaagagtcc
tcggcatctggagagaccagtgggctgcaggaggcagacggagtagctgagatcttagaa
gccgtcacctacactcaagcctcgcccaaagaagcaaaagttgaacccataaacacacct
ccaactccatcctccccctttgaagacatggaactttctggtgaacctgtacccgagggg
accctggaaaccaccaacatgagcatcatccagcacagcagccccaaacaagggtctggt
gagatcctgaatgacacactggagggggttcattctgtggatggtgaccccattactgac
agcggctcaggggctggggccttccttgacattgctgaagaaaagaatttagcagcaaca
gcagcggggctggccgaggtgcccatcagcactgctggagaagcagaggccagcagtgtg
cccaccgggggaccaaccctctctatgtccacggagaacccagaggaaggggtcactcca
ggtccagataatgaagagcgtttagcagcaacagcagcaggggaggccgaggcactcgcc
agcatgcctggggaagtggaggccagtggtgtggcccccggggagctggacctctccatg
tccgcccagagcctcggggaagaggccactgtgggtccaagcagtgaagacagtttaaca
acagctgcagctgcaaccgaagtgtccctcagtacttttgaggatgaggaagccagtggg
gtccccacagatggcctggctcccctcacagccaccatggcccctgagcgggcagtcact
tctggtcctggtgatgaagaagacttggcagcagccacaacagaggagcccctcatcaca
gctgggggtgaagagtccggcagccctccccctgatgggccaccgctgcccctgcccaca
gtggctcctgaaagatggatcactccagctcaaagagaacatgtgggaatgaaaggacag
gctgggcccaaaggagaaaagggtgatgctggggaggagcttcctggccctcctgaacct
tctgggcctgttggacccacggcaggagcagaagcagagggctctggcctaggctggggc
tcggacgtcggctctggctctggtgacctggtgggcagtgagcagctgctgagaggtcct
ccaggacccccagggccacctggcttacctgggattccaggaaaaccaggaactgatgtt
ttcatgggaccccctggatctcctggagaggatggacctgctggtgaacctgggcccccg
ggccctgagggacagcctggagttgatggagccaccggccttcccgggatgaaaggggag
aagggagcaagagggcctaatggctcagttggtgaaaagggtgaccctggcaacagaggc
ttacctggacccccggggaaaaagggacaagctggccctcctggggtcatgggaccccca
gggcctcctggaccccctgggcccccaggccctggatgcacaatgggacttggattcgag
gataccgaaggctctggaagcacccagctattgaatgaacccaaactctccagaccaacg
gctgcaattggtctcaaaggagagaaaggagaccggggacccaagggagaaagggggatg
gatggagccagtattgtgggaccccctgggccgagagggccacctgggcacatcaaggtc
ttgtctaattccttgatcaatatcacccatggattcatgaatttctcggacattcctgag
ctggtggggcctccggggccggacgggttgcctgggctgccaggatttccaggtcctaga
ggaccaaaaggtgacactggtttacctggctttccaggactaaaaggagaacagggcgag
aagggagagccgggtgccatcctgacagaggacattcctctggaaaggctgatggggaaa
aagggtgaacctggaatgcatggagccccaggaccaatggggcccaaaggaccaccagga
cataaaggagaatttggccttcccgggcgacctggtcgcccaggactgaatggcctcaag
ggtaccaaaggagatccaggggtcattatgcagggcccacctggcttacctggccctcca
ggcccccctgggccacctggagctgtgattaacatcaaaggagccattttcccaataccc
gtccgaccacactgcaaaatgccagttgatactgctcatcctgggagtccagagctcatc
acttttcacggtgttaaaggagagaaaggatcctggggtcttcctggctcaaagggagaa
aaaggcgaccagggagcccagggaccaccaggtcctccacttgatctagcttacctgaga
cactttctgaacaacttgaagggggagaatggagacaaggggttcaaaggtgaaaaagga
gaaaaaggagacattaatggcagcttccttatgtctgggcctccaggcctgcccggaaat
ccaggcccggctggccaaaaaggggagacagtcgttgggccccaaggacccccaggtgct
cctggtctgcctgggccacctggctttggaagacctggtgatcctgggccaccggggccc
ccggggccaccaggacctccagctatcctgggagcagctgtggcccttccaggtccccct
ggccctccaggacagccagggcttcccggatccagaaacctggtcacagcattcagcaac
atggatgacatgctgcagaaagcgcatttggttatagaaggaacattcatctacctgagg
gacagcactgagtttttcattcgtgttagagatggctggaaaaaattacagctgggagaa
ctgatccccattcctgccgacagccctccaccccctgcgctttccagcaacccacatcag
cttctgcctccaccaaaccctatttcaagtgccaattatgagaagcctgctctgcatttg
gctgctctgaacatgccattttctggggacattcgagctgattttcagtgcttcaagcag
gccagagctgcaggactgttgtccacctaccgagcattcttatcttcccatttgcaagat
ctgtccaccattgtgaggaaagcagagagatacagccttcccatagtgaacctcaagggc
caagtactttttaataattgggactcaattttttctggccacggaggtcagttcaatatg
catattccaatatactcctttgatggtcgagacataatgacagatccttcttggccccag
aaagtcatttggcatggctccagcccccatggcgtccgccttgtggataactactgtgaa
gcatggcgaaccgcggacacagcggtcacgggacttgcctccccgctgagcacggggaag
attctggaccagaaagcatacagctgtgctaatcggctaattgtcctatgtatcgaaaac
agtttcatgacagacgctaggaagtaa

  All links  
Disease (1)   
   OMIM (1)   
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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