KEGG   Homo sapiens (human): 131405
Entry
131405            CDS       T01001                                 
Symbol
TRIM71, HYC4, HYDCC1, LIN-41, LIN41
Name
(RefSeq) tripartite motif containing 71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa05206  MicroRNAs in cancer
Disease
H01677  Congenital hydrocephalus
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    131405 (TRIM71)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    131405 (TRIM71)
   04121 Ubiquitin system [BR:hsa04121]
    131405 (TRIM71)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     131405 (TRIM71)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131405 (TRIM71)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    131405 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL ANCHR-like_BBOX zf-C3HC4 zf-RING_5
Other DBs
NCBI-GeneID: 131405
NCBI-ProteinID: NP_001034200
OMIM: 618570
HGNC: 32669
Ensembl: ENSG00000206557
UniProt: Q2Q1W2
Structure
Position
3:32817997..32897824
AA seq 868 aa
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRSA
PGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGPGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
SDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQ
MDRPSGIAITPDGMIVVVDFGNNRILVF
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggcttcgttccccgagaccgatttccagatctgcttgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtccgcgtcgtcgtcctcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccctggggcggcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccctgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcggcgggagagccgctcaagctgcgctgccccgtgtgcgaccagaaagtagtgcta
gccgaggcggcgggtatggacgcgctgccttcgtccgccttcctgcttagcaacctgctc
gacgcggtggtggccactgccgacgagccgccgcccaagaacgggcgcgccggcgctccg
gcgggagcgggcggccacagcaaccaccggcaccacgctcaccacgcgcacccgcgcgcg
tccgcctccgcgccgccactcccgcaggcgccgcagccgcccgcgccttcccgctcggca
cccggcggccctgccgcttccccgtcggcgctgctgctccgccgtcctcacggctgcagc
tcgtgcgatgagggcaacgcagcttcttcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgagcgcaccagcgcgtgcgcctcaccaaggaccactacatcgagcgc
ggcccgccgggtcccggtgccgcagcagcggcgcagcagctcgggctcgggccgcccttt
cccggcccgcccttctccatcctctcagtgtttcccgagcgcctcggcttctgccagcac
cacgacgacgaggtgctgcacctgtactgtgacacttgctctgtacccatctgtcgtgag
tgcacaatgggccggcatgggggccacagcttcatctacctccaggaggcactgcaggac
tcacgggcactcaccatccagctgctggcagatgcccagcagggacgacaggcaatccag
ctgagcatcgagcaggcccagacggtggcggaacaggtggagatgaaggcgaaggttgtg
cagtcggaggtcaaagccgtgacggcgaggcataagaaagccctggaggaacgcgagtgt
gagctgctgtggaaggtagaaaagatccgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcggcaaaacctcaacaagcttgagagcaccatcagtgccgtgcagcag
gtcctggaggagggtagagcgctagacatcctactggcccgagaccggatgctggcccag
gtgcaggagctgaagaccgtgcggagcctcctgcagccccaggaagacgaccgagtcatg
ttcacaccccccgatcaggcactgtaccttgccatcaagtcttttggctttgttagcagc
ggggcctttgccccactcaccaaggccacaggcgatggcctcaagcgtgccctccagggt
aaggtggcctccttcacagtcattggttatgaccacgatggtgagccccgcctctcagga
ggcgacctgatgtcggctgtggtcctgggccctgatggcaacctgtttggtgcagaggtg
agtgatcagcagaatgggacatacgtggtgagttaccgaccccagctggagggtgagcac
ctggtatctgtgacactgtgcaaccagcacattgagaacagccctttcaaggtggtggtc
aagtcaggccgcagctacgtgggcattgggctcccgggcctgagcttcggcagtgagggt
gacagcgatggcaagctctgccgcccttggggtgtgagtgtagacaaggagggctacatc
attgtcgccgaccgcagcaacaaccgcatccaggtgttcaagccctgcggcgccttccac
cacaaattcggcaccctgggctcccggcctgggcagttcgaccgaccagccggcgtggcc
tgtgacgcctcacgcaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
acgttcgagggccagttcctcctcaagtttggtgagaaaggaaccaagaatgggcagttc
aactacccttgggatgtggcggtgaattctgagggcaagatcctggtctcagacacgagg
aaccaccggatccagctgtttgggcctgatggtgtcttcctaaacaagtatggcttcgag
ggggctctctggaagcactttgactccccacggggtgtggccttcaaccatgagggccac
ttggtggtcactgacttcaacaaccaccggctcctggttattcaccccgactgccagtcg
gcacgctttctgggctcggagggcacaggcaatgggcagttcctgcgcccacaaggggta
gctgtggaccaggaagggcgcatcattgtggcggattccaggaaccatcgggtacagatg
tttgaatccaacggcagcttcctgtgcaagtttggtgctcaaggcagcggctttgggcag
atggaccgcccttccggcatcgccatcacccccgacggaatgatcgttgtggtggacttt
ggcaacaatcgaatcctcgtcttctaa

  All links  
Disease (2)   
   OMIM (2)   
Gene (20)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system