KEGG   Homo sapiens (human): 2559Help
Entry
2559              CDS       T01001                                 

Gene name
GABRA6
Definition
(RefSeq) gamma-aminobutyric acid type A receptor alpha6 subunit
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04080  Neuroactive ligand-receptor interaction
hsa04723  Retrograde endocannabinoid signaling
hsa04727  GABAergic synapse
hsa04742  Taste transduction
hsa05032  Morphine addiction
hsa05033  Nicotine addiction
Drug target
Abecarnil: D02594
Adinazolam (DG00911): D02770 D02771
Adipiplon: D08840
Alpidem: D02833
Alprazolam: D00225
Aminobutyric acid: D00058
Amobarbital (DG00916): D00555 D02252
Aprobarbital: D00698
Barbexaclone: D07298
Barbital: D01740
Bretazenil: D03155
Bromazepam: D01245
Brotizolam: D01744
Butabarbital (DG01308): D00699
Butobarbital: D02618
Chlordiazepoxide (DG00908): D00267 D00693
Cinolazepam: D07328
Clobazam: D01253
Clonazepam: D00280
Clotiazepam: D01328
Cloxazolam: D01268
Delorazepam: D07784
Dextofisopam: D03737
Diazepam: D00293
Estazolam: D00311
Eszopiclone: D02624
Ethyl loflazepate: D01293
Etizolam: D01514
Fludiazepam: D01354
Flumazenil: D00697
Flunitrazepam: D01230
Flurazepam (DG00919): D00329 D00695 D01408
Flutazolam: D01286
Flutoprazepam: D01279
Gaboxadol: D04282
Ganaxolone: D04300
Glutethimide: D00532
Halazepam: D00338
Haloxazolam: D01758
Hexobarbital: D01071
Indiplon: D02640
Iomazenil: D02283
Ketazolam: D04650
Levotofisopam: D04721
Loprazolam (DG00921): D07326 D08145
Lorazepam: D00365
Lormetazepam: D01657
Medazepam (DG00909): D01292 D04882
Meprobamate: D00376
Metharbital: D01382
Methylphenobarbital: D00700
Mexazolam: D01316
Midazolam (DG00920): D00550 D00696 D05028
Nimetazepam: D01593
Nitrazepam: D00531
Nordazepam: D08283
Ocinaplon: D02617
Oxazepam: D00464
Oxazolam: D01278
Pagoclone: D02616
Pentobarbital (DG00915): D00499 D00500 D02253
Phenobarbital (DG00845): D00506 D00701 D08356
Potassium clorazepate (DG01218): D00694 D03562
Prazepam: D00470
Propofol (DG00797): D00549 D04257
Quazepam: D00457
Remimazolam besilate: D10194
Rilmazafone (DG01307): D01564 D08481
Sarmazenil: D08507
Secobarbital (DG00917): D00430 D01310
Talbutal: D06887
Temazepam: D00370
Thiamylal (DG01377): D00713 D06106
Thiopental (DG00790): D00714
Tofisopam: D01254
Topiramate: D00537
Triazolam: D00387
Zolpidem (DG00922): D00706 D08690
Zopiclone: D01372
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    2559 (GABRA6)
 Organismal Systems
  Nervous system
   04727 GABAergic synapse
    2559 (GABRA6)
   04723 Retrograde endocannabinoid signaling
    2559 (GABRA6)
  Sensory system
   04742 Taste transduction
    2559 (GABRA6)
 Human Diseases
  Substance dependence
   05032 Morphine addiction
    2559 (GABRA6)
   05033 Nicotine addiction
    2559 (GABRA6)
Ion channels [BR:hsa04040]
 Ligand-gated channels
  GABA-A
   2559 (GABRA6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Neur_chan_LBD Neur_chan_memb DUF4396
Motif
Other DBs
NCBI-GeneID: 2559
NCBI-ProteinID: NP_000802
OMIM: 137143
HGNC: 4080
Ensembl: ENSG00000145863
Vega: OTTHUMG00000130351
Pharos: Q16445(Tclin)
UniProt: Q16445
Position
5q34
AA seq 453 aa AA seqDB search
MASSLPWLCIILWLENALGKLEVEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQFAAPPTVTISKATEPLEAEI
VLHPDSKYHLKKRITSLSLPIVSSSEANKVLTRAPILQSTPVTPPPLSPAFGGTSKIDQY
SRILFPVAFAGFNLVYWVVYLSKDTMEVSSSVE
NT seq 1362 nt NT seq  +upstreamnt  +downstreamnt
atggcgtcgtctctgccctggctgtgcattattctgtggctagaaaatgccctagggaaa
ctcgaagttgaaggcaacttctactcagaaaacgtcagtcggatcctggacaacttgctt
gaaggctatgacaatcggctgcggccgggatttggaggtgctgtcactgaagtcaaaaca
gacatttatgtgaccagttttgggcccgtgtcagatgtggagatggagtatacgatggat
gtttttttccgccagacctggactgatgagaggttgaagtttggggggccaactgagatt
ctgagtctgaataatttgatggtcagtaaaatctggacgcctgacacctttttcagaaat
ggtaaaaagtccattgctcacaacatgacaactcctaataaactcttcagaataatgcag
aatggaaccattttatacaccatgaggcttaccatcaatgctgactgtcccatgaggctg
gttaactttcctatggatgggcatgcttgtccactcaagtttgggagctatgcttatccc
aaaagtgaaatcatatatacgtggaaaaaaggaccactttactcagtagaagtcccagaa
gaatcttcaagccttctccagtatgatctgattggacaaacagtatctagtgagacaatt
aaatctaacacaggtgaatacgttataatgacagtttacttccacttgcaaaggaagatg
ggctacttcatgatacagatatacactccttgcattatgacagtcattctttcccaggtg
tctttctggattaataaggagtccgtcccagcaagaactgtttttgggatcaccactgtt
ttaactatgaccactttgagcatcagtgcccggcactctttgccaaaagtgtcatatgcc
actgccatggattggttcatagctgtttgctttgcattcgtcttctctgcgcttatcgag
ttcgcagctgtcaactactttaccaatcttcagacacagaaggccaaaaggaaggcacag
tttgcagccccacccacagtgacaatatcaaaagctactgaacctttggaagctgagatt
gttttgcatcctgactccaaatatcatctgaagaaaaggatcacttctctgtctttgcca
atagtttcatcttccgaggccaataaagtgctcacgagagcgcccatcttacaatcaaca
cctgtcacacccccaccactctcgccagcctttggaggcaccagtaaaatagaccagtat
tctcgaattctcttcccagttgcatttgcaggattcaaccttgtgtactgggtagtttat
ctttccaaagatacaatggaagtcagtagcagtgttgaatag

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