KEGG   Homo sapiens (human): 2590Help
Entry
2590              CDS       T01001                                 

Gene name
GALNT2, GalNAc-T2
Definition
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 2
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
hsa  Homo sapiens (human)
Pathway
hsa00512  Mucin type O-glycan biosynthesis
hsa00514  Other types of O-glycan biosynthesis
hsa01100  Metabolic pathways
Module
hsa_M00056  O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    2590 (GALNT2)
   00514 Other types of O-glycan biosynthesis
    2590 (GALNT2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:hsa01003]
    2590 (GALNT2)
Enzymes [BR:hsa01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     2590 (GALNT2)
Glycosyltransferases [BR:hsa01003]
 O-Glycan biosynthesis
  Mucin-type
   2590 (GALNT2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_transf_7C Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID: 2590
NCBI-ProteinID: NP_004472
OMIM: 602274
HGNC: 4124
Ensembl: ENSG00000143641
Vega: OTTHUMG00000037771
Pharos: Q10471(Tbio)
UniProt: Q10471 A0A1L7NY50
Structure
PDB: 

Position
1q42.13
AA seq 571 aa AA seqDB search
MRRRSRMLLCFAFLWVLGIAYYMYSGGGSALAGGAGGGAGRKEDWNEIDPIKKKDLHHSN
GEEKAQSMETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLRMDRAIPD
TRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSND
PEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLER
VAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAP
IKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV
FRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLELRKK
LSCKPFKWYLENVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGVYECHNAGGNQ
EWALTKEKSVKHMDLCLTVVDRAPGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCL
DSRTAKSGGLSVEVCGPALSQQWKFTLNLQQ
NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt
atgcggcggcgctcgcggatgctgctctgcttcgccttcctgtgggtgctgggcatcgcc
tactacatgtactcggggggcggctctgcgctggccgggggcgcgggcggcggcgccggc
aggaaggaggactggaatgaaattgaccccattaaaaagaaagaccttcatcacagcaat
ggagaagagaaagcacaaagcatggagaccctccctccagggaaagtacggtggccagac
tttaaccaggaagcttatgttggagggacgatggtccgctccgggcaggacccttacgcc
cgcaacaagttcaaccaggtggagagtgataagcttcgaatggacagagccatccctgac
acccggcatgaccagtgtcagcggaagcagtggcgggtggatctgccggccaccagcgtg
gtgatcacgtttcacaatgaagccaggtcggccctactcaggaccgtggtcagcgtgctt
aagaaaagcccgccccatctcataaaagaaatcatcttggtggatgactacagcaatgat
cctgaggacggggctctcttggggaaaattgagaaagtgcgagttcttagaaatgatcga
cgagaaggcctcatgcgctcacgggttcggggggccgatgctgcccaagccaaggtcctg
accttcctggacagtcactgcgagtgtaatgagcactggctggagcccctcctggaaagg
gtggcggaggacaggactcgggttgtgtcacccatcatcgatgtcattaatatggacaac
tttcagtatgtgggggcatctgctgacttgaagggcggttttgattggaacttggtattc
aagtgggattacatgacgcctgagcagagaaggtcccggcaggggaacccagtcgcccct
ataaaaacccccatgattgctggtgggctgtttgtgatggataagttctattttgaagaa
ctggggaagtacgacatgatgatggatgtgtggggaggagagaacctagagatctcgttc
cgcgtgtggcagtgtggtggcagcctggagatcatcccgtgcagccgtgtgggacacgtg
ttccggaagcagcacccctacacgttcccgggtggcagtggcactgtctttgcccgaaac
acccgccgggcagcagaggtctggatggatgaatacaaaaatttctattatgcagcagtg
ccttctgctagaaacgttccttatggaaatattcagagcagattggagcttaggaagaaa
ctcagctgcaagcctttcaaatggtaccttgaaaatgtctatccagagttaagggttcca
gaccatcaggatatagcttttggggccttgcagcagggaactaactgcctcgacactttg
ggacactttgctgatggtgtggttggagtttatgaatgtcacaatgctgggggaaaccag
gaatgggccttgacgaaggagaagtcggtgaagcacatggatttgtgccttactgtggtg
gaccgggcaccgggctctcttataaagctgcagggctgccgagaaaatgacagcagacag
aaatgggaacagatcgagggcaactccaagctgaggcacgtgggcagcaacctgtgcctg
gacagtcgcacggccaagagcgggggcctaagcgtggaggtgtgtggcccggccctttcg
cagcagtggaagttcacgctcaacctgcagcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Disease (1)   
   OMIM (1)   
Chemical substance (1)   
   KEGG COMPOUND (1)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (13)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (41)   
   RefSeq(nuc) (7)   
   GenBank (17)   
   EMBL (17)   
Protein domain (5)   
   Pfam (5)   
All databases (90)   

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