KEGG   Homo sapiens (human): 25904
Entry
25904             CDS       T01001                                 
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    25904 (CNOT10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    25904 (CNOT10)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     25904 (CNOT10)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_14 ARM_TT21_N TPR_12 TPR_19 ARM_TT21 TPR_8 TPR_MalT TPR_7 TPR_17 DUF6058
Other DBs
NCBI-GeneID: 25904
NCBI-ProteinID: NP_056257
OMIM: 620508
HGNC: 23817
Ensembl: ENSG00000182973
UniProt: Q9H9A5
Structure
Position
3:32685188..32773875
AA seq 744 aa
MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGAKNSNQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRK
KPVFQPVHPIQPIQMPAFTTVQRK
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaaggcacaggtcagtcc
tctgggatcactgatcaagagaaggagttatccaccaatgctttccaagctttcacatct
ggaaattatgatgcctgtctacaacaccttgcctgtctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagtaaccaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtccactcagctgttgaagaa
atggatggattagatgatgttgaaaacagcatgttgtactataatcaagcagtcattctt
tatcatctgcggcagtatacagaagccatatcagttggtgaaaaactttatcagttcata
gagccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctgtatata
ttaacctaccaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
cagggtaacaataacaaaaatggaaagaatgagactggtaataacaacaacaaagatgga
tctaatcataaagctgaaagtggagctctaatagaagctgcaaaatcaaagatacatcag
tacaaagtacgagcttatatccaaatgaagtctctgaaagcatgtaaaagggaaatcaag
tcagtcatgaatacagctggaaattccgcaccctctctctttcttaaaagcaattttgag
tacttaagaggtaattatcgaaaagccgtgaagctattaaatagttcaaacattgctgag
catccaggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataaccttggt
tgcatccattttgccatgagcaagcacaatttgggaatattctactttaaaaaggctctg
caagagaatgacaatgtctgtgcacagctcagtgcaggtagcactgatccaggtaaaaaa
ttttcaggaagacccatgtgtacgttactaaccaataagagatatgagttgctgtataac
tgtggaattcagcttcttcacattggaaggcctcttgctgccttcgaatgtctgattgaa
gctgttcaggtttatcatgcaaatcctcgcctctggctacggctggctgaatgctgcatt
gctgccaataaggggacttctgaacaagaaactaaaggccttcccagcaaaaaaggaatt
gtacagtctattgttggtcaaggctatcatcgtaaaatagttttggcatcacagtctata
cagaatactgtttataatgatgggcagtcttcggccattcctgtagccagtatggagttt
gcagccatatgtctcagaaatgccttgttgctgctacctgaagaacagcaagatccaaag
caggaaaatggggctaaaaatagtaatcaattaggtgggaacacagagagcagcgaaagc
agtgaaacttgcagcagtaaaagccatgatggagataaattcattccagctccaccttct
tctccattgagaaaacaggaattagaaaacttaaagtgctccatacttgcttgcagtgcc
tacgtggctctggctttgggtgataacctcatggctttgaatcatgcagataaacttctt
cagcagcccaagctgtcaggatctcttaagtttttgggacatttatatgctgcagaagcc
ctcatctctctcgacagaatatctgatgccattactcacttgaacccggagaatgtcact
gatgtctccttagggatctcttcaaatgagcaggaccaaggatcagacaaaggtgaaaat
gaagcaatggaatcctctggtaagcgggcccctcagtgctaccccagttccgtcaactct
gccaggactgtgatgctgttcaaccttggcagcgcttactgcctgaggagcgaatatgac
aaagcccgaaagtgtctccaccaggcggcttcaatgatccatcctaaagaggtgccccct
gaggccatcttgctggcagtctaccttgaactgcagaatggtaatactcagctggcctta
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacacactctgaagtgagaaag
aagccagtgtttcagcctgtccacccgatccagcccatccaaatgccggctttcaccact
gtgcagagaaagtga

  All links  
Disease (1)   
   OMIM (1)   
Gene (9)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (27)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (25)   
DNA sequence (63)   
   RefSeq(nuc) (29)   
   GenBank (17)   
   EMBL (17)   
3D Structure (2)   
   PDB (2)   
Protein domain (12)   
   Pfam (12)   
All databases (114)   

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