KEGG   Homo sapiens (human): 27072Help
Entry
27072             CDS       T01001                                 

Gene name
VPS41, HVPS41, HVSP41, hVps41p
Definition
(RefSeq) VPS41 subunit of HOPS complex
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
hsa  Homo sapiens (human)
Pathway
hsa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    27072 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    27072 (VPS41)
Membrane trafficking [BR:hsa04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    27072 (VPS41)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Clathrin ANAPC4_WD40 Vps39_2 Vps39_1 zf-RING_5 zf-RING_2 zf-rbx1 zf-RING_11
Motif
Other DBs
NCBI-GeneID: 27072
NCBI-ProteinID: NP_055211
OMIM: 605485
HGNC: 12713
Ensembl: ENSG00000006715
Vega: OTTHUMG00000023629
Pharos: P49754(Tbio)
UniProt: P49754
Position
7p14.1
AA seq 854 aa AA seqDB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA
KNRGPGSAILEMKK
NT seq 2565 nt NT seq  +upstreamnt  +downstreamnt
atggcggaagcagaggagcaggaaactgggtcccttgaagaatctacagatgagtctgag
gaagaagagagcgaagaggaacccaagctgaagtatgaaaggctttccaatggggtaact
gaaatacttcagaaggatgcagctagctgcatgacagtccatgacaagtttttggcattg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcttggatgaaagtggagagcacatgggt
gtgtgttcagaggatggcaaggtgcaggtatttggactgtattctggagaagaatttcac
gagacttttgactgtcccattaaaattattgctgtgcacccacatttcgtgagatccagt
tgcaagcagtttgtgaccggagggaagaagctgctactgtttgaacggtcttggatgaac
agatggaagtctgctgttctgcatgaaggggaagggaacataaggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcatctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgcccagacatgtatccctgc
agcctctgctggaaggacaatgtgacactgattattggctgggggacttctgtcaaggtg
tgctcagtgaaggaacggcatgccagtgaaatgagggatttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggacttgcacctctctgtgatcag
cttgttgtactttcgtatgtaaaggagatttcagaaaaaacggaaagagaatactgtgcc
aggcctagactggacatcatccagccactttctgagacttgtgaagagatctcttctgat
gctttgacagtcagaggctttcaggagaatgaatgtagagattatcatttagaatactct
gaaggggaatcacttttttacatcgtgagtccgagagatgttgtagtggccaaggaacga
gaccaagatgatcacattgactggctccttgaaaagaagaaatatgaagaagcattgatg
gcagctgaaattagccaaaaaaatattaaaagacataagattctggatattggcttggca
tatataaatcacctggtggagagaggagactatgacatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga
cagcttaaggctattagtccttatttgccaagaggtgatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggagagtgattatgagggttttgccacattgatc
cgagaatggcctggagatctgtataataattcagtcatagttcaagcagttcgggatcat
ttgaagaaagatagtcagaacaagactttacttaaaaccctggcagaattgtacacctat
gacaagaactatggcaatgctctggaaatatacttaacattaagacataaagacgttttt
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtagtggaagaattggaagacagaccagagctacagcatgtgtatttgcataag
cttttcaagagagaccaccataaggggcagcgttaccatgaaaaacagatcagtctttat
gctgaatatgatcgaccaaacttacttccctttctccgagacagtacccattgcccactt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaatagccgaagtgccctgaagatgattatggaggaattacatgatgtt
gataaagcaatcgaatttgccaaggagcaagatgatggagagctgtgggaagatttgatt
ttatattccattgacaaaccaccatttattactggcttgttaaacaacattggcacacat
gttgacccaattctactgattcaccgtattaaggaaggaatggagatccccaatttgaga
gattccttggttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgc
aagaagattctcgtagctgactctttgtccttactgaagaaaatgcaccgaactcaaatg
aaaggtgttcttgttgatgaggagaacatctgtgagtcgtgcctttcccctattcttcca
tcagatgcagctaagcccttcagcgtggtggtcttccattgccggcacatgttccacaag
gagtgcctgcccatgcccagcatgaactctgctgcacagttctgcaacatctgcagtgct
aagaaccgtggaccaggaagtgcaattttggagatgaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (22)   
   RefSeq(nuc) (4)   
   GenBank (9)   
   EMBL (9)   
Protein domain (8)   
   Pfam (8)   
All databases (56)   

Download RDF
DBGET integrated database retrieval system