KEGG   Homo sapiens (human): 27097
Entry
27097             CDS       T01001                                 
Symbol
TAF5L, PAF65B
Name
(RefSeq) TATA-box binding protein associated factor 5 like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
hsa  Homo sapiens (human)
Pathway
hsa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    27097 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    27097 (TAF5L)
   03036 Chromosome and associated proteins [BR:hsa03036]
    27097 (TAF5L)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     27097 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     27097 (TAF5L)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     27097 (TAF5L)
    STAGA complex
     27097 (TAF5L)
    TFTC complex
     27097 (TAF5L)
    SAGA complex
     27097 (TAF5L)
    SLIK complex
     27097 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Beta-prop_IP5PC_F Ge1_WD40 WD_LRWD1 Nbas_N Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 27097
NCBI-ProteinID: NP_055224
HGNC: 17304
Ensembl: ENSG00000135801
UniProt: O75529
Structure
Position
1:complement(229593134..229626122)
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR
NTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtgcgtaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactcagatggtcccctgaagcaaggactgcggctgtcacagactgctgaa
gagatggcggccaatctaacagtgcaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgcggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccaaaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaatgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctatctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctcaccttacatattcatcttgacgtgcag
cctgccaagagaacagactatcagctgtatgccagtggcagctcctcccgcagtgagaac
aacggtttggagccccccgacatgcccagccctattctgcagaacgaggctgccctagag
gtcttacaggagagcattaagcgagtcaaggatgggcctccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctcccccgatagc
aagctgcttgctgctgggtttgacaactcctgtataaaactttggagtttacgatccaag
aagttaaaatcagagccccaccaagtagacgtgtcccgcatccatttggcttgtgatatt
ctggaggaggaggatgatgaggatgataatgcaggcacggagatgaagatactgcggggc
cactgcggaccagtgtacagcacgaggttcctcgcggacagctcagggttgctctcttgt
tctgaagacatgtccatcagatactgggatctggggagtttcaccaacactgtgttgtac
caaggacatgcctatcctgtgtgggatctggacatcagtccatatagcctgtacttcgcc
agcgggtcccacgaccgcaccgccaggctgtggtcatttgatcggacgtacccgctgagg
atatatgcaggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttggccacgggctcaaccgacaagaccgtccggctgtggagcgctcagcaggggaactcg
gtgaggcttttcacaggccaccgtggccccgtgctttctctcgccttttctcccaacggt
aagtacttggcgtctgctggcgaggaccagcggttgaagctgtgggacttggcctctggg
accctttataaagagttgagaggccacacagacaatatcaccagcctcaccttcagtcca
gacagcggcttgattgcctctgcctccatggacaactcggtgcgcgtctgggacatcagg
aacacttactgcagtgcacctgccgacggctcctccagcgagctcgtgggcgtgtacacc
gggcagatgagcaacgtcctgagcgtgcagttcatggcctgtaaccttcttctggtgact
ggaattacacaagaaaatcaggaacattaa

  All links  
Gene (9)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (24)   
   RefSeq(nuc) (12)   
   GenBank (6)   
   EMBL (6)   
3D Structure (3)   
   PDB (3)   
Protein domain (38)   
   Pfam (38)   
All databases (88)   

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