KEGG   Homo sapiens (human): 27327
Entry
27327             CDS       T01001                                 
Symbol
TNRC6A, CAGH26, FAME6, GW1, GW182, TNRC6
Name
(RefSeq) trinucleotide repeat containing adaptor 6A
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
hsa  Homo sapiens (human)
Disease
H02213  Familial adult myoclonic epilepsy
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    27327 (TNRC6A)
   03036 Chromosome and associated proteins [BR:hsa03036]
    27327 (TNRC6A)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     27327 (TNRC6A)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    27327 (TNRC6A)
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 27327
NCBI-ProteinID: NP_055309
OMIM: 610739
HGNC: 11969
Ensembl: ENSG00000090905
Pharos: Q8NDV7(Tbio)
UniProt: Q8NDV7
Structure
Position
16:24610205..24826218
AA seq 1962 aa
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQQQQQPQQQQPQQQPQPQPQQQ
QPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSALTN
QQPQNNGEVQNSKNQSDINHSTSGSHYENSQRGPVSSTSDSSTNCKNAVVSDLSEKEAWP
SAPGSDPELASECMDADSASSSESERNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSS
SNNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPST
LNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGGSTHGTW
GSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSSNT
GAWRVSTMNHPQMQAPSGMNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSGPNGQ
ANGDTVNATLMQPGVNGPMGTNFQVNTNKGGGVWESGAANSQSTSWGSGNGANSGGSRRG
WGTPAQNTGTNLPSVEWNKLPSNQHSNDSANGNGKTFTNGWKSTEEEDQGSATSQTNEQS
SVWAKTGGTVESDGSTESTGRLEEKGTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSN
SGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNGNDTSSV
SGWGDPKPALRWGDSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKAAWNDSQKNKQGWG
DGQKSSQGWSVSASDNWGETSRNNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGN
NINPNNSSGWDESSKPTPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPP
ATGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVN
MWNKNVPNGNSRSDQQAQVHQLLTPASAISNKEASSGSGWGEPWGEPSTPATTVDNGTSA
WGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTG
WEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAW
INPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPG
SRPQISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGM
QNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLL
KYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRPQQ
DQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQPLHQPAMKSFLDNVMPHTTPELQK
GPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAI
SSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKG
YPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASN
YNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQ
KPPLSTWDNSPLRIGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTL
CMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFF
AQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWG
TPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq 5889 nt   +upstreamnt  +downstreamnt
atgagagaattggaagctaaagctaccaaagacgtagaaagaaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagctacagccaacaatcagcagccacagcagcagcagcaa
cagcagcagccgcagcagcagcagccacagcagcagccacagccgcagccgcagcagcag
cagccacagcagcagccacaggccttgcctcggtatcctcgtgaagtacctccacgattt
cgccaccaggaacacaaacagcttctaaagaggggtcagcattttcctgttatagcagca
aaccttggatctgctgttaaggtgttaaacagccagtcagaaagcagtgctttaacaaat
caacagccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccac
agtacttcaggatcccattatgaaaattcccagcggggacctgtgtcttctacaagtgat
tctagcacaaactgtaagaatgctgttgtaagtgacttgtcggaaaaagaagcatggccc
tcagcccctggcagtgatccggagttggcttcagaatgtatggatgctgattctgcctcc
agttctgaatcagagagaaacatcactatcatggcttcagggaacacaggtggtgaaaaa
gatggccttcggaatagcactggacttggttcccaaaacaagtttgtagttggtagcagc
agcaataatgtgggccatggaagtagtactgggccatggggtttttcccatggagccata
ataagcacatgtcaggtctctgtggatgctcctgaaagcaaatctgaaagtagcaacaat
agaatgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcact
ttgaattcagctagcaaccatggtgcctggccagtattagagaacaatggacttgcccta
aaagggcctgtagggagtggtagttctggcattaatattcagtgcagtactataggccag
atgcctaacaatcagagtattaactctaaagtgagtggtggttctacccatggtacctgg
ggaagccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagt
ggtcaacctcaaaatattaccactgaaatgactggaccaaataacactactaactttatg
acctctagtttaccaaactccggttcagtgcagaataatgagctgcctagtagtaacaca
ggggcctggcgtgtgagcacaatgaatcatcctcagatgcaggctccatcaggtatgaat
ggcacttccctttctcaccttagcaatggagagtcaaaaagtggaggctcttatggtact
acatggggtgcctatggttctaattactctggagacaaatgttcaggccctaatggccaa
gctaatggtgacactgtgaatgcaactctaatgcagcctggcgtaaatggtcctatgggc
actaactttcaagttaacacaaacaaaggaggtggtgtgtgggaatctggtgcagcaaac
tcccagagtacatcatggggaagtggaaatggcgcaaattctggaggaagtcgaagagga
tggggaacccctgcacaaaacactggcactaatttacccagcgttgagtggaacaaactg
cctagcaatcagcattccaatgatagtgcaaatggcaatggtaagacgtttacaaatgga
tggaaatctactgaggaagaggatcagggttctgccacatctcagacaaatgagcaaagc
agtgtgtgggccaaaacaggaggtacagtggagagcgatggtagtacagaaagcactgga
cgccttgaggaaaaaggaactggggaaagtcagagtagagacagaagaaaaattgatcag
cacacattactccaaagcattgtaaacagaactgacttagatccacgtgtcctgtccaac
tctggttggggacagactcctattaagcagaatactgcctgggatacagaaacatcacct
agaggggaacgaaagactgacaatgggacagaggcctggggaagctctgcaacacagact
tttaactcaggggcatgtatagataagactagccctaatggtaatgatacctcatctgta
tcagggtggggcgatcccaaacctgctctgaggtggggagattccaaaggctcaaactgc
cagggggggtgggaagatgattctgctgctacaggaatggtcaagagcaatcagtggggg
aattgcaaagaggagaaggctgcatggaatgactcgcaaaagaataaacagggatggggt
gatggacaaaaatcaagccaagggtggtctgtttctgccagtgataactggggagaaact
tcaaggaataaccattggggtgaggccaataagaaatccagctcaggaggtagtgacagt
gacaggtccgtttccggttggaacgaacttggtaaaactagttctttcacttggggaaac
aacataaatccaaataattcatcaggatgggatgaatcttctaaacctactccttcccag
ggatggggagaccctccaaagtctaatcagtctctaggttggggagattcgtcaaagcca
gtcagctctccagactggaacaagcaacaagacattgttggatcttggggaatcccacca
gctacaggcaaacctcctggtacaggctggctggggggacctataccagccccagcaaaa
gaagaagaacccacaggctgggaggaaccatccccagaatctatacgtcgcaaaatggag
attgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaatgtgaac
atgtggaacaaaaacgtcccaaatggcaacagccgttcagaccagcaagcacaggtacat
cagctgctaacgcctgcaagtgccatctcaaacaaagaggcaagcagtggctctggctgg
ggtgagccctggggggagccttctactccagccacaactgtggataatggtacttcagca
tggggtaagcccatagacagtggtcccagctggggggaacccattgctgcggcatccagc
acatccacgtggggctccagctctgttggtccacaagcattaagcaaatctgggccaaaa
tctatgcaagatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggc
tgggaagaggaagaggatgtggagattggaatgtggaatagtaattcatctcaagagctt
aactcatctttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggc
aaaaaaaggagaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaagcgtgg
ataaatccatttgttaaacagttttcaaacatcagtttttcgagagactcaccagaggaa
aatgtacaaagcaataagatggacctttctggaggaatgttacaagacaaacgaatggag
atagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggt
tctcggcctcagatttccaaagagtcttccatggagcgcaatccttattttgataaggat
ggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagctt
cccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctgggtatg
caaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaacaca
gcagcacaaccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcct
aatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctg
aagtatgcaccaaacaacggtggcctgaatccactctttggccctcaacaggtagccatg
ctgaaccagctatcccagctaaaccagctttctcagatctcccagttacagcgattgtta
gcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggccgcagcaa
gaccagcagggtcgacctcttagtgtgcagcagcaaatgatgcaacaatctcgtcaactt
gatccaaacctgttggtgaagcagcagactccaccatctcagcagcagccactccatcag
ccagccatgaagtctttccttgacaatgtcatgccccacactacacctgagctgcaaaaa
gggccatcaccaataaatgctttcagcaacttccctataggcttgaactcaaacttgaat
gtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtggacgaca
gtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatt
tcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagcagt
acttcaccagccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcct
aacggctctagcagtgttaattggccaccagaatttcgtcctggtgagccatggaaaggt
tatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaat
ctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcc
tcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaac
tacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaa
ttgacatggtctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtc
cctttgccacctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcag
aagccacccttgtctacgtgggataattctccccttcgtataggtggaggatggggaaat
tctgacgccagatataccccaggttccagctggggtgagagcagctcagggagaataaca
aattggcttgttctaaaaaaccttacacctcagatcgatggctcaactctgcgcactctg
tgcatgcagcacggcccgctgatcacattccacctgaacctccctcacggaaatgctctg
gtccgctacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgta
ctggggaacactactattcttgctgagtttgccagtgaagaggagatcagtcgtttcttt
gcacaaagccagtctctgaccccttctcccggctggcagtctctcgggtccagccagagc
cggctgggctccctcgactgttcccactcattctccagccggaccgatctcaatcactgg
aatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttcactctggggg
accccgcattattccacaagcctgtggggtcccccaagcagcagcgacccccgaggaatt
agcagcccatctcccattaacgcttttctttctgttgaccacctgggtgggggtggagag
tccatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
   PHAROS (1)   
Protein sequence (90)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (88)   
DNA sequence (120)   
   RefSeq(nuc) (88)   
   GenBank (16)   
   EMBL (16)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (252)   

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