KEGG   Homo sapiens (human): 29101
Entry
29101             CDS       T01001                                 
Symbol
SSU72, HSPC182, PNAS-120
Name
(RefSeq) SSU72 homolog, RNA polymerase II CTD phosphatase
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    29101 (SSU72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    29101 (SSU72)
   03019 Messenger RNA biogenesis [BR:hsa03019]
    29101 (SSU72)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     29101 (SSU72)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     29101 (SSU72)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     29101 (SSU72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 29101
NCBI-ProteinID: NP_054907
OMIM: 617680
HGNC: 25016
Ensembl: ENSG00000160075
UniProt: Q9NP77
Structure
Position
1:complement(1541673..1574863)
AA seq 194 aa
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRTFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgtcgtccccgctgcgggtggcggtggtgtgctcgagcaaccagaaccggagcatg
gaggcgcacaacatcctcagcaaacggggattcagcgtccgatcctttggaacagggact
cacgtgaagcttccaggaccagctcccgacaagcccaatgtttatgatttcaaaaccaca
tatgaccagatgtacaatgatcttcttaggaaagacaaagaactctatacacagaatggg
attttacatatgctggacagaaataagagaatcaagccccggccagaaagattccagaac
tgcaaagacctgtttgatctgatcctcacttgcgaagagagagtgtatgaccaggtggtg
gaagatctgaattccagagaacaggagacctgccagcctgtgcacgtggtcaatgtggac
atccaggacaaccacgaggaggccaccctgggggcgtttctcatctgtgagctctgccag
tgtatccagcacacggaagacatggagaacgagatcgacgagctgctgcaggagttcgag
gagaagagtggccgcacctttctgcacaccgtctgcttctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (29)   
   RefSeq(nuc) (1)   
   GenBank (14)   
   EMBL (14)   
3D Structure (4)   
   PDB (4)   
Protein domain (1)   
   Pfam (1)   
All databases (55)   

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