KEGG   Homo sapiens (human): 29883
Entry
29883             CDS       T01001                                 
Symbol
CNOT7, CAF-1, CAF1, Caf1a, hCAF-1
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    29883 (CNOT7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    29883 (CNOT7)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     29883 (CNOT7)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     29883 (CNOT7)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 29883
NCBI-ProteinID: NP_001309019
OMIM: 604913
HGNC: 14101
Ensembl: ENSG00000198791
Pharos: Q9UIV1(Tbio)
UniProt: Q9UIV1 Q96IQ6
Structure
Position
8:complement(17224966..17246857)
AA seq 285 aa
MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgccagcggcaactgtagatcatagccaaagaatttgtgaagtttgggcttgcaacttg
gatgaagagatgaagaaaattcgtcaagttatccgaaaatataattacgttgctatggac
accgagtttccaggtgtggttgcaagacccattggagaattcaggagcaatgctgactat
caataccaactattgcggtgtaatgtagacttgttaaagataattcagctaggactgaca
tttatgaatgagcaaggagaataccctccaggaacttcaacttggcagtttaattttaaa
tttaatttgacggaggacatgtatgcccaggactctatagagctactaacaacatctggt
atccagtttaaaaaacatgaggaggaaggaattgaaacccagtactttgcagaacttctt
atgacttctggagtggtcctctgtgaaggggtcaaatggttgtcatttcatagcggttac
gactttggctacttaatcaaaatcctaaccaactctaacttgcctgaagaagaacttgac
ttctttgagatccttcgattgttttttcctgtcatttatgatgtgaagtacctcatgaag
agctgcaaaaatctcaaaggtggattacaggaggtggcagaacagttagagctggaacgg
ataggaccacaacatcaggcaggatctgattcattgctcacaggaatggcctttttcaaa
atgagagaaatgttctttgaagatcatattgatgatgccaaatattgtggtcatttgtat
ggccttggttctggttcatcctatgtacagaatggcacagggaatgcatatgaagaggaa
gccaacaagcagtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
   PHAROS (1)   
Protein sequence (23)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (76)   
   RefSeq(nuc) (20)   
   GenBank (28)   
   EMBL (28)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (129)   

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