KEGG   Homo sapiens (human): 328Help
Entry
328               CDS       T01001                                 

Gene name
APEX1, APE, APE1, APEN, APEX, APX, HAP1, REF1
Definition
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 1
  KO
K10771  AP endonuclease 1 [EC:4.2.99.18]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    328 (APEX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    328 (APEX1)
Enzymes [BR:hsa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     328 (APEX1)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     328 (APEX1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID: 328
NCBI-ProteinID: NP_001231178
OMIM: 107748
HGNC: 587
Ensembl: ENSG00000100823
Vega: OTTHUMG00000029544
Pharos: P27695(Tchem)
UniProt: P27695 Q5TZP7
Structure
PDB: 

Position
14q11.2
AA seq 318 aa AA seqDB search
MPKRGKKGAVAEDGDELRTEPEAKKSKTAAKKNDKEAAGEGPALYEDPPDQKTSPSGKPA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGF
GELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq 957 nt NT seq  +upstreamnt  +downstreamnt
atgccgaagcgtgggaaaaagggagcggtggcggaagacggggatgagctcaggacagag
ccagaggccaagaagagtaagacggccgcaaagaaaaatgacaaagaggcagcaggagag
ggcccagccctgtatgaggaccccccagatcagaaaacctcacccagtggcaaacctgcc
acactcaagatctgctcttggaatgtggatgggcttcgagcctggattaagaagaaagga
ttagattgggtaaaggaagaagccccagatatactgtgccttcaagagaccaaatgttca
gagaacaaactaccagctgaacttcaggagctgcctggactctctcatcaatactggtca
gctccttcggacaaggaagggtacagtggcgtgggcctgctttcccgccagtgcccactc
aaagtttcttacggcataggcgatgaggagcatgatcaggaaggccgggtgattgtggct
gaatttgactcgtttgtgctggtaacagcatatgtacctaatgcaggccgaggtctggta
cgactggagtaccggcagcgctgggatgaagcctttcgcaagttcctgaagggcctggct
tcccgaaagccccttgtgctgtgtggagacctcaatgtggcacatgaagaaattgacctt
cgcaaccccaaggggaacaaaaagaatgctggcttcacgccacaagagcgccaaggcttc
ggggaattactgcaggctgtgccactggctgacagctttaggcacctctaccccaacaca
ccctatgcctacaccttttggacttatatgatgaatgctcgatccaagaatgttggttgg
cgccttgattactttttgttgtcccactctctgttacctgcattgtgtgacagcaagatc
cgttccaaggccctcggcagtgatcactgtcctatcaccctatacctagcactgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (20)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (42)   
   RefSeq(nuc) (4)   
   GenBank (19)   
   EMBL (19)   
Protein domain (2)   
   Pfam (2)   
All databases (89)   

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