KEGG   Homo sapiens (human): 3720
Entry
3720              CDS       T01001                                 

Gene name
JARID2, JMJ
Definition
(RefSeq) jumonji and AT-rich interaction domain containing 2
  KO
K11478  protein Jumonji
Organism
hsa  Homo sapiens (human)
Pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    3720 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    3720 (JARID2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    3720 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 3720
NCBI-ProteinID: NP_004964
OMIM: 601594
HGNC: 6196
Ensembl: ENSG00000008083
Vega: OTTHUMG00000014293
Pharos: Q92833(Tbio)
UniProt: Q92833
Structure
PDB: 
6C24 6C23

Position
6p22.3
AA seq 1246 aa
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNSQKRQHAEGIAGSLKTVN
GLLGNDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEEVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSTREKEPVQK
HKSKEATPAKEKHSDHRADSRREQASANHPAAAPSTGSSAKGLAATHHHPPLHRSAQDLR
KQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTATVTKGAVTYTKAKRELVKDT
KPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAVNGLKVSGRLNPKSCTK
EVGGRQLREGLQLREGLRNSKRRLEEAHQAEKPQSPPKKMKGAAGPAEGPGKKAPAERGL
LNGHVKKEVPERSLERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSG
KAEKGGGKAGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECK
LNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFFR
LINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLE
KEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEPKNGLIHGVAPRNGFRSKLKEVGQA
QLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMSMCFSKE
PAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTG
SILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKL
EDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVC
CGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLST
ISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQ
ICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKV
SGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSASSSSKSASSSS
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaacgggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaattcccagaagaggcagcatgcggaaggcattgctgggagcctgaaaactgtgaat
gggctccttggtaatgaccagtctaagggattaggaccagcatcagaacagtcagagaat
gaaaaggacgatgcatcccaagtgtcctccactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcagtct
cagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccccctcca
gctactcagatatcagacctctctaaaaggaagcctaagacagaagattttcttaccttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtgtattttggaagctctcag
gatgaggaggaagtcgaggaggaagatgatgagacagaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcgacccccaggaaaggaaaaacccacaaacatgttcac
aacgggcatgttttcaatggttccagcaggtcaacacgggagaaggaacctgttcaaaaa
cacaaaagcaaagaggccactcccgcaaaggagaagcacagcgatcaccgggctgacagc
cgccgggagcaggcttcagctaaccaccccgcagcggccccctccacgggttcctcggcc
aaggggcttgctgccacccatcaccacccccctctgcatcggtcggctcaggacttacgg
aaacaggtttctaaggtaaacggagtcactcgaatgtcatctctgggtgcaggtgtaacc
agtgccaaaaagatgcgcgaggtcagaccttcaccatccaaaactgtgaagtacactgcc
acggtgacgaagggggctgtcacatacaccaaagccaagagagaactggtcaaggacacc
aaacccaatcaccacaagcccagttccgctgtcaaccacacaatctcagggaaaactgaa
agtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaagtccact
gggcccgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaag
gaggtgggggggcggcagctgcgggagggcctgcagctgcgggaggggctgcggaactcc
aagaggagactggaagaggcacaccaggcggagaagccgcagtcgccccccaagaagatg
aaaggggcggctggccccgccgaaggccctggcaagaaggccccggccgagagaggtctg
ctgaacggacacgtgaagaaggaagtgccggagcgcagtctggagaggaatcggccgaag
cgggccacggccgggaagagcacgccaggcagacaagcacatggcaaggcggacagcgcc
tcctgtgaaaatcgttctacctcgcaaccggagtccgtgcacaagccgcaggactcgggc
aaggccgagaagggcggcggcaaggccgggtgggcggccatggacgagatccccgtcctc
aggccctccgccaaggagttccacgatccgctcatctacatcgagtcggtccgcgctcag
gtggagaagttcgggatgtgcagggtgatcccccctccggactggcggcccgagtgcaag
ctcaacgatgagatgcggtttgtcacgcagattcagcacatccacaagctgggccggcgc
tggggccccaacgtgcagcggctggcctgcatcaagaagcacctcaaatctcagggcatc
accatggacgagctcccgctcatagggggctgtgagctcgacctggcctgctttttccgg
ctgattaatgagatgggcggcatgcagcaagtgactgacctcaaaaaatggaacaaacta
gcagacatgctgcgcatccccagaactgcccaggaccggctggccaagctgcaggaggcc
tactgccagtacctactctcctacgactccctgtccccagaggagcaccggcggctggag
aaggaggtgctgatggagaaggagatcctggagaagcgcaaggggccgctggaaggccac
acagagaacgaccaccacaagttccaccctctgccccgcttcgagcccaagaatgggctc
atccacggcgtggcccccaggaacggcttccgcagcaagctcaaggaggtgggccaggcc
cagttgaagactggccggcggcgactcttcgctcaggaaaaagaagtggtcaaggaagag
gaggaggacaaaggcgtcctcaatgacttccacaagtgcatctataagggaaggtctgtt
tctctaacaactttttatcgaacagcgaggaatatcatgagcatgtgtttcagcaaggag
cctgccccagccgaaatcgagcaagagtactggaggctagtggaagagaaggactgccac
gtggcagtgcactgcggcaaggtggacaccaacactcacggcagtggattcccagtagga
aaatcagaacccttttcgaggcatggatggaacctcaccgtcctccccaataacacaggg
tccatcctgcgtcacctcggtgctgtgcctggagtgactattccctggctaaatattggc
atggtcttttctacctcatgctggtctcgagaccaaaatcaccttccatacattgactac
ttacacactggtgctgactgcatttggtattgcattcctgctgaggaggagaacaagctg
gaagatgtggtccacaccctgctgcaagccaatggcaccccagggctgcagatgctggaa
agcaacgtcatgatctccccggaggtgctgtgcaaagaggggatcaaggtgcacaggacc
gtgcagcagagtggccagtttgtcgtctgcttcccgggatcctttgtgtccaaagtgtgc
tgtgggtacagcgtgtctgaaaccgtgcactttgctaccacccagtggacaagtatgggc
tttgagaccgccaaggaaatgaagcgtcgccatatagctaagccattctccatggagaag
ttactctaccagattgcacaagcagaagcaaaaaaagaaaacggtcccactctcagtacc
atctcagccctcctggatgagctcagggatacagagctgcggcagcgcaggcagctgttc
gaggctggcctccactcctccgcacgctatggcagccacgatggcagcagcacggtggcg
gacgggaagaaaaagcctcgaaagtggctgcagttggagacgtcagagaggaggtgtcag
atctgccagcacctgtgctacctgtccatggtggtacaagagaacgaaaacgtcgtgttc
tgtctggagtgtgctctgcgccacgtggagaaacagaagtcctgccgagggctgaagttg
atgtaccgctacgatgaggaacagattatcagtctggtcaatcagatctgcggcaaagtg
tctggtaaaaacggcagcattgagaactgtctcagtaaacccacaccaaaaagaggtccc
cgcaagagagcgacagtggacgtgcccccctcccgtctgtcagcctccagttcatccaaa
agtgcttcgagctcatcatga

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