KEGG   Homo sapiens (human): 4060
Entry
4060              CDS       T01001                                 

Gene name
LUM, LDC, SLRR2D
Definition
(RefSeq) lumican
  KO
K08122  lumican
Organism
hsa  Homo sapiens (human)
Pathway
hsa05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    4060 (LUM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:hsa00535]
    4060 (LUM)
Proteoglycans [BR:hsa00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class II
    4060 (LUM)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_6 LRRNT LRR_9 LRR_5
Other DBs
NCBI-GeneID: 4060
NCBI-ProteinID: NP_002336
OMIM: 600616
HGNC: 6724
Ensembl: ENSG00000139329
Vega: OTTHUMG00000170074
Pharos: P51884(Tbio)
UniProt: P51884 A0A384N669
Position
12q21.33
AA seq 338 aa
MSLSAFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCPESYPSAMYCDELKLKS
VPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGRVFSKLKQLKK
LHINHNNLTESVGPLPKSLEDLQLTHNKITKLGSFEGLVNLTFIHLQHNRLKEDAVSAAF
KGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIPDEYFKRFNALQYLRLSHNE
LADSGIPGNSFNVSSLVELDLSYNKLKNIPTVNENLENYYLEVNQLEKFDIKSFCKILGP
LSYSKIKHLRLDGNRISETSLPPDMYECLRVANEVTLN
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgagtctaagtgcatttactctcttcctggcattgattggtggtaccagtggccagtac
tatgattatgattttcccctatcaatttatgggcaatcatcaccaaactgtgcaccagaa
tgtaactgccctgaaagctacccaagtgccatgtactgtgatgagctgaaattgaaaagt
gtaccaatggtgcctcctggaatcaagtatctttaccttaggaataaccagattgaccat
attgatgaaaaggcctttgagaatgtaactgatctgcagtggctcattctagatcacaac
cttctagaaaactccaagataaaagggagagttttctctaaattgaaacaactgaagaag
ctgcatataaaccacaacaacctgacagagtctgtgggcccacttcccaaatctctggag
gatctgcagcttactcataacaagatcacaaagctgggctcttttgaaggattggtaaac
ctgaccttcatccatctccagcacaatcggctgaaagaggatgctgtttcagctgctttt
aaaggtcttaaatcactcgaataccttgacttgagcttcaatcagatagccagactgcct
tctggtctccctgtctctcttctaactctctacttagacaacaataagatcagcaacatc
cctgatgagtatttcaagcgttttaatgcattgcagtatctgcgtttatctcacaacgaa
ctggctgatagtggaatacctggaaattctttcaatgtgtcatccctggttgagctggat
ctgtcctataacaagcttaaaaacataccaactgtcaatgaaaaccttgaaaactattac
ctggaggtcaatcaacttgagaagtttgacataaagagcttctgcaagatcctggggcca
ttatcctactccaagatcaagcatttgcgtttggatggcaatcgcatctcagaaaccagt
cttccaccggatatgtatgaatgtctacgtgttgctaacgaagtcactcttaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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