KEGG   Homo sapiens (human): 4086
Entry
4086              CDS       T01001                                 
Symbol
SMAD1, BSP-1, BSP1, JV4-1, JV41, MADH1, MADR1
Name
(RefSeq) SMAD family member 1
  KO
K04676  mothers against decapentaplegic homolog 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04081  Hormone signaling
hsa04350  TGF-beta signaling pathway
hsa04390  Hippo signaling pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
hsa05202  Transcriptional misregulation in cancer
Network
nt06240  Transcription (cancer)
nt06507  TGFB signaling
  Element
N00119  MLL-AF4 fusion to transcriptional activation
N01426  BMP9/10 signaling pathway
N01453  BMP signaling pathway
N01454  AMH signaling pathway
N01455  BMP15 signaling pathway
N01457  Myostatin signaling pathway
N01458  BMP-HAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    4086 (SMAD1)
   04390 Hippo signaling pathway
    4086 (SMAD1)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    4086 (SMAD1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    4086 (SMAD1)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    4086 (SMAD1)
SSDB
Motif
Pfam: MH2 MH1 IRF-3 DUF4223
Other DBs
NCBI-GeneID: 4086
NCBI-ProteinID: NP_001003688
OMIM: 601595
HGNC: 6767
Ensembl: ENSG00000170365
UniProt: Q15797
Structure
Position
4:145480770..145559176
AA seq 465 aa
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPN
SHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQ
PMDTNMMAPPLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaatgtgacaagtttattttcctttacaagtccagctgtgaagagacttcttgggtgg
aaacagggcgatgaagaagaaaaatgggcagagaaagctgttgatgctttggtgaaaaaa
ctgaagaaaaagaaaggtgccatggaggaactggaaaaggccttgagctgcccagggcaa
ccgagtaactgtgtcaccattccccgctctctggatggcaggctgcaagtctcccaccgg
aagggactgcctcatgtcatttactgccgtgtgtggcgctggcccgatcttcagagccac
catgaactaaaaccactggaatgctgtgagtttccttttggttccaagcagaaggaggtc
tgcatcaatccctaccactataagagagtagaaagccctgtacttcctcctgtgctggtt
ccaagacacagcgaatataatcctcagcacagcctcttagctcagttccgtaacttagga
caaaatgagcctcacatgccactcaacgccacttttccagattctttccagcaacccaac
agccacccgtttcctcactctcccaatagcagttacccaaactctcctgggagcagcagc
agcacctaccctcactctcccaccagctcagacccaggaagccctttccagatgccagct
gatacgcccccacctgcttacctgcctcctgaagaccccatgacccaggatggctctcag
ccgatggacacaaacatgatggcgcctcccctgccctcagaaatcaacagaggagatgtt
caggcggttgcttatgaggaaccaaaacactggtgctctattgtctactatgagctcaac
aatcgtgtgggtgaagcgttccatgcctcctccacaagtgtgttggtggatggtttcact
gatccttccaacaataagaaccgtttctgccttgggctgctctccaatgttaaccggaat
tccactattgaaaacaccaggcggcatattggaaaaggagttcatctttattatgttgga
ggggaggtgtatgccgaatgccttagtgacagtagcatctttgtgcaaagtcggaactgc
aactaccatcatggatttcatcctactactgtttgcaagatccctagtgggtgtagtctg
aaaatttttaacaaccaagaatttgctcagttattggcacagtctgtgaaccatggattt
gagacagtctatgagcttacaaaaatgtgtactatacgtatgagctttgtgaagggctgg
ggagcagaataccaccgccaggatgttactagcaccccctgctggattgagatacatctg
cacggccccctccagtggctggataaagttcttactcaaatgggttcacctcataatcct
atttcatctgtatcttaa

  All links  
Disease (1)   
   OMIM (1)   
Gene (36)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (23)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (21)   
DNA sequence (49)   
   RefSeq(nuc) (21)   
   GenBank (14)   
   EMBL (14)   
3D Structure (10)   
   PDB (10)   
Protein domain (4)   
   Pfam (4)   
All databases (123)   

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KEGG   Homo sapiens (human): 4090
Entry
4090              CDS       T01001                                 
Symbol
SMAD5, DWFC, JV5-1, MADH5
Name
(RefSeq) SMAD family member 5
  KO
K16790  mothers against decapentaplegic homolog 5
Organism
hsa  Homo sapiens (human)
Pathway
hsa04081  Hormone signaling
hsa04350  TGF-beta signaling pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06507  TGFB signaling
  Element
N01426  BMP9/10 signaling pathway
N01453  BMP signaling pathway
N01454  AMH signaling pathway
N01455  BMP15 signaling pathway
N01457  Myostatin signaling pathway
N01458  BMP-HAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    4090 (SMAD5)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    4090 (SMAD5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    4090 (SMAD5)
SSDB
Motif
Pfam: MH2 MH1 IRF-3
Other DBs
NCBI-GeneID: 4090
NCBI-ProteinID: NP_001001419
OMIM: 603110
HGNC: 6771
Ensembl: ENSG00000113658
UniProt: Q99717 Q68DB7
Structure
Position
5:136132845..136182733
AA seq 465 aa
MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP
NNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQP
MDTSNNMIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgacgtcaatggccagcttgttttcttttactagtccagcagtaaagcgattgttgggc
tggaaacaaggtgatgaggaggagaaatgggcagaaaaggcagttgatgctttggtgaag
aaactaaaaaagaaaaagggtgccatggaggaactggagaaagccttgagcagtccagga
cagccgagtaaatgtgtcactattcccagatctttagatggacgcctgcaggtttctcac
agaaaaggcttaccccatgttatatattgtcgtgtttggcgctggccggatttgcagagt
catcatgagctaaagccgttggatatttgtgaatttccttttggatctaagcaaaaagaa
gtttgtatcaacccataccactataagagagtggagagtccagtcttacctccagtatta
gtgcctcgtcataatgaattcaatccacaacacagccttctggttcagtttaggaacctg
agccacaatgaaccacacatgccacaaaatgccacgtttccagattctttccaccagccc
aacaacactccttttcccttatctccaaacagcccttatcccccttctcctgctagcagc
acatatcccaactccccagcaagttctggaccaggaagtccatttcagctcccagctgat
acgcctcctcctgcctatatgccacctgatgatcagatgggtcaagataattcccagcct
atggatacaagcaataatatgattcctcagattatgcccagtatatccagcagggatgtt
cagcctgttgcctatgaagagcctaaacattggtgttcaatagtctactatgaattaaac
aatcgtgttggagaagcttttcatgcatcttctactagtgtgttagtagatggattcaca
gatccttcaaataacaaaagtagattctgcttgggtttgttgtcaaatgttaatcgtaat
tcgacaattgaaaacactaggcgacatattggaaaaggtgttcatctgtactatgttggt
ggagaggtgtatgcggaatgcctcagtgacagcagcatatttgtacagagtaggaactgc
aactttcatcatggctttcatcccaccactgtctgtaagattcccagcagctgcagcctc
aaaatttttaacaatcaggagtttgctcagcttctggctcaatctgtcaaccatgggttt
gaggcagtatatgagctcaccaaaatgtgtaccattcggatgagttttgtcaagggttgg
ggagcagaatatcaccggcaggatgtaaccagcaccccatgttggattgagattcatctt
catgggcctcttcagtggctggataaagtccttactcagatgggctcccctctgaacccc
atatcttctgtttcataa

  All links  
Disease (1)   
   OMIM (1)   
Gene (28)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (53)   
   RefSeq(nuc) (9)   
   GenBank (22)   
   EMBL (22)   
3D Structure (2)   
   PDB (2)   
Protein domain (3)   
   Pfam (3)   
All databases (99)   

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KEGG   Homo sapiens (human): 4093
Entry
4093              CDS       T01001                                 
Symbol
SMAD9, MADH6, MADH9, PPH2, SMAD8, SMAD8/9, SMAD8A, SMAD8B
Name
(RefSeq) SMAD family member 9
  KO
K16791  mothers against decapentaplegic homolog 9
Organism
hsa  Homo sapiens (human)
Pathway
hsa04081  Hormone signaling
hsa04350  TGF-beta signaling pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06507  TGFB signaling
  Element
N01426  BMP9/10 signaling pathway
N01453  BMP signaling pathway
N01454  AMH signaling pathway
N01455  BMP15 signaling pathway
N01457  Myostatin signaling pathway
N01458  BMP-HAMP signaling pathway
Disease
H01619  Primary pulmonary hypertension
H01621  Pulmonary arterial hypertension
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    4093 (SMAD9)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    4093 (SMAD9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    4093 (SMAD9)
SSDB
Motif
Pfam: MH2 MH1 IRF-3 DUF4223
Other DBs
NCBI-GeneID: 4093
NCBI-ProteinID: NP_001120689
OMIM: 603295
HGNC: 6774
Ensembl: ENSG00000120693
UniProt: O15198
Structure
Position
13:complement(36844831..36920854)
AA seq 467 aa
MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALS
CPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSK
QKEVCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDS
FQQPPCSALPPSPSHAFSQSPCTASYPHSPGSPSEPESPYQHSVDTPPLPYHATEASETQ
SGQPVDATADRHVVLSIPNGDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDG
FTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSR
NCNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcactccaccacccccatcagctccctcttctccttcaccagccccgcagtgaagaga
ctgctaggctggaagcaaggagatgaagaggaaaagtgggcagagaaggcagtggactct
ctagtgaagaagttaaagaagaagaagggagccatggacgagctggagagggctctcagc
tgcccggggcagcccagcaaatgcgtcacgattccccgctccctggacgggcggctgcag
gtgtcccaccgcaagggcctgccccatgtgatttactgtcgcgtgtggcgctggccggat
ctgcagtcccaccacgagctgaagccgctggagtgctgtgagttcccatttggctccaag
cagaaagaagtgtgcattaacccttaccactaccgccgggtggagactccagtactgcct
cctgtgctcgtgccaagacacagtgaatataacccccagctcagcctcctggccaagttc
cgcagcgcctccctgcacagtgagccactcatgccacacaacgccacctatcctgactct
ttccagcagcctccgtgctctgcactccctccctcacccagccacgcgttctcccagtcc
ccgtgcacggccagctaccctcactccccaggaagtccttctgagccagagagtccctat
caacactcagttgacacaccacccctgccttatcatgccacagaagcctctgagacccag
agtggccaacctgtagatgccacagctgatagacatgtagtgctatcgataccaaatgga
gactttcgaccagtttgttacgaggagccccagcactggtgctcggtcgcctactatgaa
ctgaacaaccgagttggggagacattccaggcttcctcccgaagtgtgctcatagatggg
ttcaccgacccttcaaataacaggaacagattctgtcttggacttctttctaatgtaaac
agaaactcaacgatagaaaataccaggagacatataggaaagggtgtgcacttgtactac
gtcgggggagaggtgtatgccgagtgcgtgagtgacagcagcatctttgtgcagagccgg
aactgcaactatcaacacggcttccacccagctaccgtctgcaagatccccagcggctgc
agcctcaaggtcttcaacaaccagctcttcgctcagctcctggcccagtcagttcaccac
ggctttgaagtcgtgtatgaactgaccaagatgtgtactatccggatgagttttgttaag
ggttggggtgctgagtatcatcgccaggatgtcaccagcaccccctgctggattgagatt
catcttcatgggccactgcagtggctggacaaagttctgactcagatgggctctccacat
aaccccatttcttcagtgtcttaa

  All links  
Disease (2)   
   OMIM (2)   
Gene (21)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (22)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (20)   
DNA sequence (46)   
   RefSeq(nuc) (20)   
   GenBank (13)   
   EMBL (13)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (96)   

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