KEGG   Homo sapiens (human): 4247
Entry
4247              CDS       T01001                                 

Gene name
MGAT2, CDG2A, CDGS2, GLCNACTII, GNT-II, GNT2
Definition
(RefSeq) alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
  KO
K00736  alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]
Organism
hsa  Homo sapiens (human)
Pathway
hsa00510  N-Glycan biosynthesis
hsa00513  Various types of N-glycan biosynthesis
hsa01100  Metabolic pathways
Module
hsa_M00075  N-glycan biosynthesis, complex type
Network
nt06015  N-Glycan biosynthesis
  Element
N00820  N-Glycan biosynthesis
N00821  B4GALT1 deficiency in N-glycan biosynthesis
N00822  MGAT2 deficiency in N-glycan biosynthesis
Disease
H00119  Congenital disorders of glycosylation type II
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    4247 (MGAT2)
   00513 Various types of N-glycan biosynthesis
    4247 (MGAT2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:hsa01003]
    4247 (MGAT2)
Enzymes [BR:hsa01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.143  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
     4247 (MGAT2)
Glycosyltransferases [BR:hsa01003]
 Glycan extension
  N-Glycan
   4247 (MGAT2)
SSDB
Motif
Pfam: MGAT2
Other DBs
NCBI-GeneID: 4247
NCBI-ProteinID: NP_002399
OMIM: 602616
HGNC: 7045
Ensembl: ENSG00000168282
Vega: OTTHUMG00000140271
Pharos: Q10469(Tchem)
UniProt: Q10469
Structure
PDB: 
5VCM 5VCR 5VCS

Position
14q21.3
AA seq 447 aa
MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV
AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL
VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS
IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF
VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF
YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK
FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV
AISPPRKNGGWGDIRDHELCKSYRRLQ
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaggttccgcatctacaaacggaaggtgctaatcctgacgctcgtggtggccgcctgc
ggcttcgtcctctggagcagcaatgggcgacaaaggaagaacgaggccctcgccccaccg
ttgctggacgccgaacccgcgcggggtgccggcggccgcggtggggaccacccctctgtg
gctgtgggcatccgcagggtctccaacgtgtcggcggcttccctggtcccggcggtcccc
cagcccgaggcggacaacctgacgctgcggtaccggtccctggtgtaccagctgaacttt
gatcagaccctgaggaatgtagataaggctggcacctgggccccccgggagctggtgctg
gtggtccaggtgcataaccggcccgaatacctcagactgctgctggactcacttcgaaaa
gcccagggaattgacaacgtcctcgtcatctttagccatgacttctggtcgaccgagatc
aatcagctgatcgccggggtgaatttctgtccggttctgcaggtgttctttcctttcagc
attcagttgtaccctaacgagtttccaggtagtgaccctagagattgtcccagagacctg
ccgaagaatgccgctttgaaattggggtgcatcaatgctgagtatcccgactccttcggc
cattatagagaggccaaattctcccagaccaaacatcactggtggtggaagctgcatttt
gtgtgggaaagagtgaaaattcttcgagattatgctggccttatacttttcctagaagag
gatcactacttagccccagacttttaccatgtcttcaaaaagatgtggaaactgaagcag
caagagtgccctgaatgtgatgttctctccctggggacctatagtgccagtcgcagtttc
tatggcatggctgacaaggtagatgtgaaaacttggaaatccacagagcacaatatgggt
ctagccttgacccggaatgcctatcagaagctgatcgagtgcacagacactttctgtact
tatgatgattataactgggactggactcttcaatacttgactgtatcttgtcttccaaaa
ttctggaaagtgctggttcctcaaattcctaggatctttcatgctggagactgtggtatg
catcacaagaaaacctgtagaccatccactcagagtgcccaaattgagtcactcttaaat
aataacaaacaatacatgtttccagaaactctaactatcagtgaaaagtttactgtggta
gccatttccccacctagaaaaaatggagggtggggagatattagggaccatgaactctgt
aaaagttatagaagactgcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Network (3)   
   KEGG NETWORK (3)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (18)   
   RefSeq(nuc) (2)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (57)   

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