KEGG   Homo sapiens (human): 4440
Entry
4440              CDS       T01001                                 

Gene name
MSI1
Definition
(RefSeq) musashi RNA binding protein 1
  KO
K14411  RNA-binding protein Musashi
Organism
hsa  Homo sapiens (human)
Pathway
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    4440 (MSI1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    4440 (MSI1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4440 (MSI1)
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 PHM7_cyt
Other DBs
NCBI-GeneID: 4440
NCBI-ProteinID: NP_002433
OMIM: 603328
HGNC: 7330
Ensembl: ENSG00000135097
Vega: OTTHUMG00000169344
Pharos: O43347(Tbio)
UniProt: O43347
Position
12q24.31
AA seq 362 aa
METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGST
PSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNG
YH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggagactgacgcgccccagcccggcctcgcctccccggactcgccgcacgacccctgc
aagatgttcatcgggggactcagttggcagactacgcaggaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcaa
tcgcggcacgagctcgactccaaaacaattgaccctaaggtggccttccctcggcgagca
cagcccaagatggtgactcgaacgaagaagatctttgtgggggggctgtcggtgaacacc
acggtggaggacgtgaagcaatattttgagcagtttgggaaggtggacgacgccatgctg
atgtttgacaaaaccaccaaccggcaccgagggttcgggtttgtcacgtttgagagtgag
gacatcgtggagaaagtgtgtgaaattcattttcatgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaggaggtgatgtcgccaacgggctcagcccgggggaggtct
cgagtcatgccctacggaatggacgccttcatgctgggcatcggcatgctgggttaccca
ggtttccaagccacaacctacgccagccggagttatacaggcctcgcccctggctacacc
taccagttccccgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccattcctctcactgcctacggaccaatggcggcggcagcggcggcagcg
gctgtggttcgagggacaggctctcacccctggacgatggctccccctccaggttcgact
cccagccgcacagggggcttcctggggaccaccagccccggccccatggccgagctctac
ggggcggccaaccaggactcgggggtcagcagttacatcagcgccgccagccctgccccc
agcaccggcttcggccacagtcttgggggccctttgattgccacagccttcaccaatggg
taccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (28)   
   RefSeq(nuc) (12)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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