KEGG   Homo sapiens (human): 4481
Entry
4481              CDS       T01001                                 

Gene name
MSR1, CD204, SCARA1, SR-A, SR-AI, SR-AII, SR-AIII, SRA, phSR1, phSR2
Definition
(RefSeq) macrophage scavenger receptor 1
  KO
K06558  macrophage scavenger receptor 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04145  Phagosome
Disease
H01901  Barrett esophagus
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    4481 (MSR1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    4481 (MSR1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:hsa04090]
    4481 (MSR1)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    4481 (MSR1)
CD molecules [BR:hsa04090]
 Proteins
  4481 (MSR1)
SSDB
Motif
Pfam: SRCR Macscav_rec Collagen SRCR_2 Hepsin-SRCR Seryl_tRNA_N GvpG CENP-F_leu_zip Laminin_II bZIP_1
Other DBs
NCBI-GeneID: 4481
NCBI-ProteinID: NP_619729
OMIM: 153622
HGNC: 7376
Ensembl: ENSG00000038945
Vega: OTTHUMG00000094809
Pharos: P21757(Tbio)
UniProt: P21757
Position
8p22
AA seq 451 aa
MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE
GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF
GRESSIEECKIRQWGTRACSHSEDAGVTCTL
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggagcagtgggatcactttcacaatcaacaggaggacactgatagctgctccgaatct
gtgaaatttgatgctcgctcaatgacagctttgcttcctccgaatcctaaaaacagccct
tcccttcaagagaaactgaagtccttcaaagctgcactgattgccctttacctcctcgtg
tttgcagttctcatccctctcattggaatagtggcagctcaactcctgaagtgggaaacg
aagaattgctcagttagttcaactaatgcaaatgatataactcaaagtctcacgggaaaa
ggaaatgacagcgaagaggaaatgagatttcaagaagtctttatggaacacatgagcaac
atggagaagagaatccagcatattttagacatggaagccaacctcatggacacagagcat
ttccaaaatttcagcatgacaactgatcaaagatttaatgacattcttctgcagctaagt
accttgttttcctcagtccagggacatgggaatgcaatagatgaaatctccaagtcctta
ataagtttgaataccacattgcttgatttgcagctcaacatagaaaatctgaatggcaaa
atccaagagaataccttcaaacaacaagaggaaatcagtaaattagaggagcgtgtttac
aatgtatcagcagaaattatggctatgaaagaagaacaagtgcatttggaacaggaaata
aaaggagaagtgaaagtactgaataacatcactaatgatctcagactgaaagattgggaa
cattctcagaccttgagaaatatcactttaattcaaggtcctcctggacccccgggtgaa
aaaggagatcgaggtcccactggagaaagtggtccacgaggatttccaggtccaataggt
cctccgggtcttaaaggtgatcggggagcaattggctttcctggaagtcgaggactccca
ggatatgccggaaggccaggaaattctggaccaaaaggccagaaaggggaaaaggggagt
ggaaacacattaactccatttacgaaagttcgactggtcggtgggagcggccctcacgag
gggagggtggagatactccacagcggccagtggggtacaatttgtgacgatcgctgggaa
gtgcgcgttggacaggtcgtctgtaggagcttgggatacccaggtgttcaagccgtgcac
aaggcagctcactttggacaaggtactggtccaatatggctgaatgaagtgttttgtttt
gggagagaatcatctattgaagaatgtaaaattcggcaatgggggacaagagcctgttca
cattctgaagatgctggagtcacttgcactttataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (23)   
   RefSeq(nuc) (5)   
   GenBank (9)   
   EMBL (9)   
Protein domain (10)   
   Pfam (10)   
All databases (72)   

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