KEGG   Homo sapiens (human): 5093
Entry
5093              CDS       T01001                                 
Symbol
PCBP1, HEL-S-85, HNRPE1, HNRPX, hnRNP-E1, hnRNP-X
Name
(RefSeq) poly(rC) binding protein 1
  KO
K12889  poly(rC)-binding protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa04216  Ferroptosis
hsa04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5093 (PCBP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04216 Ferroptosis
    5093 (PCBP1)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    5093 (PCBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    5093 (PCBP1)
   03041 Spliceosome [BR:hsa03041]
    5093 (PCBP1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     5093 (PCBP1)
Spliceosome [BR:hsa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    5093 (PCBP1)
SSDB
Motif
Pfam: KH_1 KH_2 KhpA-B_KH MOEP19 Bac_chlorC
Other DBs
NCBI-GeneID: 5093
NCBI-ProteinID: NP_006187
OMIM: 601209
HGNC: 8647
Ensembl: ENSG00000169564
UniProt: Q15365 Q53SS8
Structure
Position
2:70087477..70089203
AA seq 356 aa
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggatgccggtgtgactgaaagtggactaaatgtgactctcaccattcggcttcttatg
cacggaaaggaagtaggaagcatcattgggaagaaaggggagtcggttaagaggatccgc
gaggagagtggcgcgcggatcaacatctcggaggggaattgtccggagagaatcatcact
ctgaccggccccaccaatgccatctttaaggctttcgctatgatcatcgacaagctggag
gaagatatcaacagctccatgaccaacagtaccgcggccagcaggcccccggtcaccctg
aggctggtggtgccggccacccagtgcggctccctgattgggaaaggcgggtgtaagatc
aaagagatccgcgagagtacgggggcgcaggtccaggtggcgggggatatgctgcccaac
tccaccgagcgggccatcaccatcgctggcgtgccgcagtctgtcaccgagtgtgtcaag
cagatttgcctggtcatgctggagacgctctcccagtctccgcaagggagagtcatgacc
attccgtaccagcccatgccggccagctccccagtcatctgcgcgggcggccaagatcgg
tgcagcgacgctgcgggctacccccatgccacccatgacctggagggaccacctctagat
gcctactcgattcaaggacaacacaccatttctccgctcgatctggccaagctgaaccag
gtggcaagacaacagtctcactttgccatgatgcacggcgggaccggattcgccggaatt
gactccagctctccagaggtgaaaggctattgggcaagtttggatgcatctactcaaacc
acccatgaactcaccattccaaataacttaattggctgcataatcgggcgccaaggcgcc
aacattaatgagatccgccagatgtccggggcccagatcaaaattgccaacccagtggaa
ggctcctctggtaggcaggttactatcactggctctgctgccagtattagtctggcccag
tatctaatcaatgccaggctttcctctgagaagggcatggggtgcagctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (16)   
   OC (1)   
   PHAROS (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (3)   
   PDB (3)   
Protein domain (5)   
   Pfam (5)   
All databases (76)   

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