KEGG   Homo sapiens (human): 51639
Entry
51639             CDS       T01001                                 
Symbol
SF3B6, CGI-110, HSPC175, Ht006, P14, SAP14, SAP14a, SF3B14, SF3B14a
Name
(RefSeq) splicing factor 3b subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    51639 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    51639 (SF3B6)
Spliceosome [BR:hsa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    51639 (SF3B6)
 Complex B
    51639 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    51639 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 51639
NCBI-ProteinID: NP_057131
OMIM: 607835
HGNC: 30096
Ensembl: ENSG00000115128
Pharos: Q9Y3B4(Tdark)
UniProt: Q9Y3B4
Structure
Position
2:complement(24067586..24076326)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagagggcgaacattcgacttccacctgaagtaaatcggata
ttgtatataagaaatttgccatacaaaatcacagctgaagaaatgtatgatatatttggg
aaatatggacctattcgtcaaatcagagtggggaacacacctgaaactagaggaacagct
tatgtggtctatgaggacatctttgatgccaagaatgcatgtgatcacctatcgggattc
aatgtttgtaacagataccttgtggttttgtactataatgccaacagggcatttcagaag
atggacacaaagaagaaggaggaacagttgaagcttctcaaggagaaatatggcatcaac
acagatccaccaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
   PHAROS (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
3D Structure (31)   
   PDB (31)   
Protein domain (3)   
   Pfam (3)   
All databases (98)   

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