KEGG   Homo sapiens (human): 5352Help
Entry
5352              CDS       T01001                                 

Gene name
PLOD2, BRKS2, LH2, TLH
Definition
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 2
  KO
K13645  procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [EC:1.14.11.4]
Organism
hsa  Homo sapiens (human)
Pathway
hsa00310  Lysine degradation
Disease
H00514  Bruck syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    5352 (PLOD2)
Enzymes [BR:hsa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     5352 (PLOD2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 Glycos_transf_2
Motif
Other DBs
NCBI-GeneID: 5352
NCBI-ProteinID: NP_000926
OMIM: 601865
HGNC: 9082
Ensembl: ENSG00000152952
Vega: OTTHUMG00000159417
Pharos: O00469(Tbio)
UniProt: O00469
Position
3q24
AA seq 737 aa AA seqDB search
MGGCTVKPQLLLLALVLHPWNPCLGADSEKPSSIPTDKLLVITVATKESDGFHRFMQSAK
YFNYTVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHYADQDDLVVMFTECFDVIFAG
GPEEVLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIGKRYLNSGGFIGYAPYVNRIV
QQWNLQDNDDDQLFYTKVYIDPLKREAINITLDHKCKIFQTLNGAVDEVVLKFENGKARA
KNTFYETLPVAINGNGPTKILLNYFGNYVPNSWTQDNGCTLCEFDTVDLSAVDVHPNVSI
GVFIEQPTPFLPRFLDILLTLDYPKEALKLFIHNKEVYHEKDIKVFFDKAKHEIKTIKIV
GPEENLSQAEARNMGMDFCRQDEKCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTR
HGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVGVWNVPYMANVYLIKGKTLRSEMNERN
YFVRDKLDPDMALCRNAREMGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDW
KEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRIS
GGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQ
RSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEG
LPVKNGTRYIAVSFIDP
NT seq 2214 nt NT seq  +upstreamnt  +downstreamnt
atggggggatgcacggtgaagcctcagctgctgctcctggcgctcgtcctccacccctgg
aatccctgtctgggtgcggactcggagaagccctcgagcatccccacagataaattatta
gtcataactgtagcaacaaaagaaagtgatggattccatcgatttatgcagtcagccaaa
tatttcaattatactgtgaaggtccttggtcaaggagaagaatggagaggtggtgatgga
attaatagtattggagggggccagaaagtgagattaatgaaagaagtcatggaacactat
gctgatcaagatgatctggttgtcatgtttactgaatgctttgatgtcatatttgctggt
ggtccagaagaagttctaaaaaaattccaaaaggcaaaccacaaagtggtctttgcagca
gatggaattttgtggccagataaaagactagcagacaagtatcctgttgtgcacattggg
aaacgctatctgaattcaggaggatttattggctatgctccatatgtcaaccgtatagtt
caacaatggaatctccaggataatgatgatgatcagctcttttacactaaagtttacatt
gatccactgaaaagggaagctattaacatcacattggatcacaaatgcaaaattttccag
accttaaatggagctgtagatgaagttgttttaaaatttgaaaatggcaaagccagagct
aagaatacattttatgaaacattaccagtggcaattaatggaaatggacccaccaagatt
ctcctgaattattttggaaactatgtacccaattcatggacacaggataatggctgcact
ctttgtgaattcgatacagtcgacttgtctgcagtagatgtccatccaaacgtatcaata
ggtgtttttattgagcaaccaaccccttttctacctcggtttctggacatattgttgaca
ctggattacccaaaagaagcacttaaactttttattcataacaaagaagtttatcatgaa
aaggacatcaaggtattttttgataaagctaagcatgaaatcaaaactataaaaatagta
ggaccagaagaaaatctaagtcaagcggaagccagaaacatgggaatggacttttgccgt
caggatgaaaagtgtgattattactttagtgtggatgcagatgttgttttgacaaatcca
aggactttaaaaattttgattgaacaaaacagaaagatcattgctcctcttgtaactcgt
catggaaagctgtggtccaatttctggggagcattgagtcctgatggatactatgcacga
tctgaagattatgtggatattgttcaagggaatagagtaggagtatggaatgtcccatat
atggctaatgtgtacttaattaaaggaaagacactccgatcagagatgaatgaaaggaac
tattttgttcgtgataaactggatcctgatatggctctttgccgaaatgctagagaaatg
ggtgtatttatgtacatttctaatagacatgaatttggaaggctattatccactgctaat
tacaatacttcccattataacaatgacctctggcagatttttgaaaatcctgtggactgg
aaggaaaagtatataaaccgtgattattcaaagattttcactgaaaatatagttgaacag
ccctgtccagatgtcttttggttccccatattttctgaaaaagcctgtgatgaattggta
gaagaaatggaacattacggcaaatggtctgggggaaaacatcatgatagccgtatatct
ggtggttatgaaaatgtcccaactgatgatatccacatgaagcaagttgatctggagaat
gtatggcttcattttatccgggagttcattgcaccagttacactgaaggtctttgcaggc
tattatacgaagggatttgcactactgaattttgtagtaaaatactcccctgaacgacag
cgttctcttcgtcctcatcatgatgcttctacatttaccataaacattgcacttaataac
gtgggagaagactttcagggaggtggttgcaaatttctaaggtacaattgctctattgag
tcaccacgaaaaggctggagcttcatgcatcctgggagactcacacatttgcatgaagga
cttcctgttaaaaatggaacaagatacattgcagtgtcatttatagatccctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (8)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (26)   
   RefSeq(nuc) (6)   
   GenBank (10)   
   EMBL (10)   
Protein domain (4)   
   Pfam (4)   
All databases (83)   

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